Strain Fitness in Marinobacter adhaerens HP15 around HP15_2100
Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,198,604 | + | HP15_2099 | 0.27 | -1.0 | |
2,198,628 | - | HP15_2099 | 0.29 | -1.2 | |
2,198,638 | + | HP15_2099 | 0.30 | -1.1 | |
2,198,638 | - | HP15_2099 | 0.30 | -1.2 | |
2,198,646 | - | HP15_2099 | 0.30 | -0.7 | |
2,198,732 | - | HP15_2099 | 0.37 | -0.5 | |
2,198,801 | + | HP15_2099 | 0.42 | -1.2 | |
2,198,910 | + | HP15_2099 | 0.51 | -1.1 | |
2,198,910 | - | HP15_2099 | 0.51 | -2.1 | |
2,198,930 | + | HP15_2099 | 0.52 | -1.0 | |
2,199,110 | - | HP15_2099 | 0.66 | -1.2 | |
2,199,373 | + | HP15_2099 | 0.87 | -1.7 | |
2,199,373 | + | HP15_2099 | 0.87 | -1.1 | |
2,199,409 | + | HP15_2099 | 0.90 | -1.7 | |
2,199,409 | + | HP15_2099 | 0.90 | -0.7 | |
2,199,429 | + | -0.4 | |||
2,199,429 | - | -2.2 | |||
2,199,538 | - | -1.2 | |||
2,199,577 | + | +0.5 | |||
2,199,703 | - | HP15_2100 | 0.28 | -0.8 | |
2,199,751 | - | HP15_2100 | 0.36 | -0.8 | |
2,199,829 | + | HP15_2100 | 0.50 | -0.8 | |
2,199,884 | + | HP15_2100 | 0.60 | -0.5 | |
2,199,894 | + | HP15_2100 | 0.62 | -0.2 | |
2,200,032 | + | HP15_2100 | 0.87 | -1.6 | |
2,200,064 | - | +0.2 | |||
2,200,202 | - | -0.5 | |||
2,200,258 | - | +0.3 | |||
2,200,467 | + | -1.3 | |||
2,200,539 | - | HP15_2101 | 0.13 | +1.2 | |
2,200,922 | - | HP15_2101 | 0.33 | -2.3 |
Or see this region's nucleotide sequence