Strain Fitness in Marinobacter adhaerens HP15 around HP15_2072
Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,172,364 | - | HP15_2071 | 0.43 | -0.8 | |
2,172,364 | - | HP15_2071 | 0.43 | +2.0 | |
2,172,403 | - | HP15_2071 | 0.49 | -0.2 | |
2,172,442 | + | HP15_2071 | 0.56 | +0.7 | |
2,172,450 | - | HP15_2071 | 0.57 | +0.3 | |
2,172,460 | - | HP15_2071 | 0.59 | +0.1 | |
2,172,484 | + | HP15_2071 | 0.63 | +0.9 | |
2,172,598 | + | HP15_2071 | 0.82 | -0.0 | |
2,172,598 | + | HP15_2071 | 0.82 | -0.2 | |
2,172,703 | - | +0.3 | |||
2,172,820 | - | +1.0 | |||
2,172,829 | + | HP15_2072 | 0.11 | +0.3 | |
2,172,944 | - | HP15_2072 | 0.49 | +0.7 | |
2,173,036 | + | HP15_2072 | 0.79 | +0.8 | |
2,173,129 | - | -0.5 | |||
2,173,228 | + | +0.4 | |||
2,173,257 | + | +1.2 | |||
2,173,649 | - | HP15_2073 | 0.40 | -0.2 | |
2,173,879 | - | HP15_2073 | 0.63 | +0.4 | |
2,173,917 | + | HP15_2073 | 0.67 | +0.7 | |
2,173,959 | - | HP15_2073 | 0.71 | +0.7 | |
2,173,996 | + | HP15_2073 | 0.74 | +0.2 | |
2,174,004 | - | HP15_2073 | 0.75 | +1.0 | |
2,174,009 | - | HP15_2073 | 0.76 | +0.3 | |
2,174,029 | - | HP15_2073 | 0.78 | -0.1 |
Or see this region's nucleotide sequence