Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1983 and HP15_1984 are separated by 92 nucleotides HP15_1984 and HP15_1985 overlap by 4 nucleotides HP15_1985 and HP15_1986 overlap by 1 nucleotides HP15_1986 and HP15_1987 are separated by 170 nucleotides HP15_1987 and HP15_1988 overlap by 2 nucleotides HP15_1988 and HP15_1989 overlap by 4 nucleotides
HP15_1983: HP15_1983 - hypothetical protein, at 2,096,907 to 2,097,542
_1983
HP15_1984: HP15_1984 - hypothetical protein, at 2,097,635 to 2,098,078
_1984
HP15_1985: HP15_1985 - protein containing phage antirepressor protein domain, at 2,098,075 to 2,098,377
_1985
HP15_1986: HP15_1986 - hypothetical protein, at 2,098,377 to 2,098,625
_1986
HP15_1987: HP15_1987 - hypothetical protein, at 2,098,796 to 2,098,936
_1987
HP15_1988: HP15_1988 - hypothetical protein, at 2,098,935 to 2,099,276
_1988
HP15_1989: HP15_1989 - hypothetical protein, at 2,099,273 to 2,099,584
_1989
Position (kb)
2098
2099 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2097.080 kb on + strand, within HP15_1983 at 2097.148 kb on + strand, within HP15_1983 at 2097.174 kb on + strand, within HP15_1983 at 2097.315 kb on - strand, within HP15_1983 at 2097.396 kb on + strand, within HP15_1983 at 2097.422 kb on + strand, within HP15_1983 at 2097.463 kb on + strand, within HP15_1983 at 2097.493 kb on + strand at 2097.867 kb on - strand, within HP15_1984 at 2098.066 kb on - strand at 2098.076 kb on - strand at 2098.236 kb on - strand, within HP15_1985 at 2098.271 kb on - strand, within HP15_1985 at 2098.302 kb on - strand, within HP15_1985 at 2098.317 kb on - strand, within HP15_1985 at 2098.317 kb on - strand, within HP15_1985 at 2098.418 kb on - strand, within HP15_1986 at 2098.802 kb on - strand at 2098.807 kb on - strand at 2098.863 kb on - strand, within HP15_1987 at 2099.046 kb on + strand, within HP15_1988 at 2099.046 kb on + strand, within HP15_1988 at 2099.054 kb on - strand, within HP15_1988 at 2099.056 kb on + strand, within HP15_1988 at 2099.091 kb on + strand, within HP15_1988 at 2099.106 kb on + strand, within HP15_1988 at 2099.109 kb on - strand, within HP15_1988 at 2099.109 kb on - strand, within HP15_1988 at 2099.114 kb on - strand, within HP15_1988 at 2099.124 kb on - strand, within HP15_1988 at 2099.138 kb on - strand, within HP15_1988 at 2099.138 kb on - strand, within HP15_1988 at 2099.226 kb on - strand, within HP15_1988 at 2099.232 kb on - strand, within HP15_1988 at 2099.241 kb on - strand, within HP15_1988 at 2099.270 kb on - strand at 2099.278 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,097,080 + HP15_1983 0.27 +0.0 2,097,148 + HP15_1983 0.38 +1.4 2,097,174 + HP15_1983 0.42 -0.5 2,097,315 - HP15_1983 0.64 -0.2 2,097,396 + HP15_1983 0.77 +0.4 2,097,422 + HP15_1983 0.81 -0.1 2,097,463 + HP15_1983 0.87 +0.1 2,097,493 + -2.7 2,097,867 - HP15_1984 0.52 +2.3 2,098,066 - +0.2 2,098,076 - +0.2 2,098,236 - HP15_1985 0.53 +0.5 2,098,271 - HP15_1985 0.65 +0.4 2,098,302 - HP15_1985 0.75 +0.4 2,098,317 - HP15_1985 0.80 +0.1 2,098,317 - HP15_1985 0.80 +1.1 2,098,418 - HP15_1986 0.16 -0.0 2,098,802 - +0.3 2,098,807 - -1.5 2,098,863 - HP15_1987 0.48 +0.6 2,099,046 + HP15_1988 0.32 +0.8 2,099,046 + HP15_1988 0.32 +0.3 2,099,054 - HP15_1988 0.35 +0.1 2,099,056 + HP15_1988 0.35 +0.3 2,099,091 + HP15_1988 0.46 +0.2 2,099,106 + HP15_1988 0.50 +0.7 2,099,109 - HP15_1988 0.51 +0.4 2,099,109 - HP15_1988 0.51 +1.2 2,099,114 - HP15_1988 0.52 -1.4 2,099,124 - HP15_1988 0.55 +0.0 2,099,138 - HP15_1988 0.59 +0.3 2,099,138 - HP15_1988 0.59 +1.1 2,099,226 - HP15_1988 0.85 +0.1 2,099,232 - HP15_1988 0.87 +0.2 2,099,241 - HP15_1988 0.89 +0.1 2,099,270 - +0.2 2,099,278 - -0.7
Or see this region's nucleotide sequence