Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1744 and HP15_tRNA33 are separated by 193 nucleotides HP15_tRNA33 and HP15_1745 are separated by 75 nucleotides HP15_1745 and HP15_1746 are separated by 171 nucleotides
HP15_1744: HP15_1744 - AAA ATPase central domain protein, at 1,842,168 to 1,843,142
_1744
HP15_tRNA33: HP15_tRNA33 - tRNA-Leu, at 1,843,336 to 1,843,422
_tRNA33
HP15_1745: HP15_1745 - methyltransferase type 11, at 1,843,498 to 1,844,151
_1745
HP15_1746: HP15_1746 - cytochrome d ubiquinol oxidase subunit I, at 1,844,323 to 1,845,765
_1746
Position (kb)
1843
1844
1845 Strain fitness (log2 ratio)
-1
0
1
2 at 1842.691 kb on + strand, within HP15_1744 at 1843.117 kb on + strand at 1843.152 kb on - strand at 1843.311 kb on + strand at 1843.511 kb on - strand at 1843.513 kb on + strand at 1843.523 kb on + strand at 1843.576 kb on - strand, within HP15_1745 at 1843.576 kb on - strand, within HP15_1745 at 1843.634 kb on - strand, within HP15_1745 at 1843.634 kb on - strand, within HP15_1745 at 1843.787 kb on - strand, within HP15_1745 at 1843.813 kb on - strand, within HP15_1745 at 1843.815 kb on + strand, within HP15_1745 at 1843.815 kb on + strand, within HP15_1745 at 1843.815 kb on + strand, within HP15_1745 at 1843.815 kb on + strand, within HP15_1745 at 1843.815 kb on + strand, within HP15_1745 at 1843.823 kb on - strand, within HP15_1745 at 1843.823 kb on - strand, within HP15_1745 at 1843.823 kb on - strand, within HP15_1745 at 1843.823 kb on - strand, within HP15_1745 at 1843.823 kb on - strand, within HP15_1745 at 1843.835 kb on - strand, within HP15_1745 at 1843.835 kb on - strand, within HP15_1745 at 1843.919 kb on + strand, within HP15_1745 at 1843.921 kb on - strand, within HP15_1745 at 1843.941 kb on + strand, within HP15_1745 at 1844.123 kb on - strand at 1844.162 kb on + strand at 1844.194 kb on - strand at 1844.317 kb on - strand at 1844.421 kb on - strand at 1844.483 kb on - strand, within HP15_1746 at 1844.588 kb on + strand, within HP15_1746 at 1844.611 kb on - strand, within HP15_1746 at 1844.696 kb on + strand, within HP15_1746 at 1844.748 kb on + strand, within HP15_1746 at 1844.748 kb on + strand, within HP15_1746 at 1844.825 kb on - strand, within HP15_1746 at 1844.930 kb on + strand, within HP15_1746 at 1844.987 kb on - strand, within HP15_1746 at 1845.025 kb on + strand, within HP15_1746
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 1,842,691 + HP15_1744 0.54 -1.4 1,843,117 + +0.2 1,843,152 - +0.0 1,843,311 + +0.5 1,843,511 - +0.4 1,843,513 + +1.9 1,843,523 + +1.7 1,843,576 - HP15_1745 0.12 +1.7 1,843,576 - HP15_1745 0.12 +0.7 1,843,634 - HP15_1745 0.21 +1.0 1,843,634 - HP15_1745 0.21 +1.1 1,843,787 - HP15_1745 0.44 +0.3 1,843,813 - HP15_1745 0.48 +0.6 1,843,815 + HP15_1745 0.48 +1.9 1,843,815 + HP15_1745 0.48 +0.6 1,843,815 + HP15_1745 0.48 +1.0 1,843,815 + HP15_1745 0.48 -0.5 1,843,815 + HP15_1745 0.48 +1.0 1,843,823 - HP15_1745 0.50 +1.8 1,843,823 - HP15_1745 0.50 +1.2 1,843,823 - HP15_1745 0.50 +0.8 1,843,823 - HP15_1745 0.50 +1.2 1,843,823 - HP15_1745 0.50 +0.8 1,843,835 - HP15_1745 0.52 -0.4 1,843,835 - HP15_1745 0.52 +0.4 1,843,919 + HP15_1745 0.64 +0.9 1,843,921 - HP15_1745 0.65 -0.7 1,843,941 + HP15_1745 0.68 +0.6 1,844,123 - +0.7 1,844,162 + +1.1 1,844,194 - -0.2 1,844,317 - +0.9 1,844,421 - +1.1 1,844,483 - HP15_1746 0.11 +0.1 1,844,588 + HP15_1746 0.18 +0.7 1,844,611 - HP15_1746 0.20 +0.4 1,844,696 + HP15_1746 0.26 +0.4 1,844,748 + HP15_1746 0.29 +0.0 1,844,748 + HP15_1746 0.29 +0.6 1,844,825 - HP15_1746 0.35 +0.2 1,844,930 + HP15_1746 0.42 +1.0 1,844,987 - HP15_1746 0.46 +0.8 1,845,025 + HP15_1746 0.49 -0.1
Or see this region's nucleotide sequence