Strain Fitness in Marinobacter adhaerens HP15 around HP15_1634

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1633 and HP15_1634 are separated by 1 nucleotidesHP15_1634 and HP15_1635 are separated by 313 nucleotides HP15_1633: HP15_1633 - 2-oxoisovalerate dehydrogenase, E1 component, beta subunit, at 1,732,327 to 1,733,304 _1633 HP15_1634: HP15_1634 - branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit, at 1,733,306 to 1,734,454 _1634 HP15_1635: HP15_1635 - malate:quinone oxidoreductase, at 1,734,768 to 1,736,204 _1635 Position (kb) 1733 1734 1735Strain fitness (log2 ratio) -1 0 1 2at 1732.308 kb on + strandat 1732.308 kb on + strandat 1732.308 kb on + strandat 1732.315 kb on + strandat 1732.316 kb on - strandat 1732.323 kb on - strandat 1732.369 kb on - strandat 1732.417 kb on - strandat 1732.549 kb on - strand, within HP15_1633at 1732.675 kb on + strand, within HP15_1633at 1732.690 kb on + strand, within HP15_1633at 1732.744 kb on + strand, within HP15_1633at 1732.818 kb on - strand, within HP15_1633at 1732.950 kb on + strand, within HP15_1633at 1732.973 kb on + strand, within HP15_1633at 1733.302 kb on - strandat 1733.406 kb on - strandat 1733.572 kb on + strand, within HP15_1634at 1733.690 kb on + strand, within HP15_1634at 1733.785 kb on - strand, within HP15_1634at 1733.797 kb on + strand, within HP15_1634at 1733.797 kb on + strand, within HP15_1634at 1733.900 kb on + strand, within HP15_1634at 1733.900 kb on + strand, within HP15_1634at 1733.900 kb on + strand, within HP15_1634at 1733.908 kb on - strand, within HP15_1634at 1733.908 kb on - strand, within HP15_1634at 1733.908 kb on - strand, within HP15_1634at 1733.908 kb on - strand, within HP15_1634at 1734.187 kb on - strand, within HP15_1634at 1734.254 kb on - strand, within HP15_1634at 1734.275 kb on + strand, within HP15_1634at 1734.359 kb on + strandat 1734.389 kb on - strandat 1734.770 kb on - strandat 1734.816 kb on - strandat 1734.882 kb on - strandat 1734.941 kb on + strand, within HP15_1635at 1735.022 kb on + strand, within HP15_1635at 1735.022 kb on + strand, within HP15_1635at 1735.030 kb on - strand, within HP15_1635at 1735.030 kb on - strand, within HP15_1635at 1735.222 kb on + strand, within HP15_1635at 1735.410 kb on + strand, within HP15_1635

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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1,732,308 + +0.4
1,732,308 + +0.4
1,732,308 + +0.9
1,732,315 + +0.3
1,732,316 - +0.8
1,732,323 - +0.3
1,732,369 - +0.5
1,732,417 - +0.9
1,732,549 - HP15_1633 0.23 -0.1
1,732,675 + HP15_1633 0.36 +0.8
1,732,690 + HP15_1633 0.37 -0.4
1,732,744 + HP15_1633 0.43 -0.0
1,732,818 - HP15_1633 0.50 +0.7
1,732,950 + HP15_1633 0.64 -0.5
1,732,973 + HP15_1633 0.66 +0.3
1,733,302 - +0.1
1,733,406 - +0.4
1,733,572 + HP15_1634 0.23 +0.4
1,733,690 + HP15_1634 0.33 +0.9
1,733,785 - HP15_1634 0.42 +0.4
1,733,797 + HP15_1634 0.43 +2.0
1,733,797 + HP15_1634 0.43 +0.4
1,733,900 + HP15_1634 0.52 +0.5
1,733,900 + HP15_1634 0.52 +0.0
1,733,900 + HP15_1634 0.52 +0.2
1,733,908 - HP15_1634 0.52 +0.1
1,733,908 - HP15_1634 0.52 +0.9
1,733,908 - HP15_1634 0.52 -0.8
1,733,908 - HP15_1634 0.52 +0.3
1,734,187 - HP15_1634 0.77 +1.2
1,734,254 - HP15_1634 0.83 +0.8
1,734,275 + HP15_1634 0.84 +0.6
1,734,359 + +0.2
1,734,389 - +0.6
1,734,770 - +0.1
1,734,816 - +0.1
1,734,882 - -0.7
1,734,941 + HP15_1635 0.12 +0.2
1,735,022 + HP15_1635 0.18 -1.5
1,735,022 + HP15_1635 0.18 +0.7
1,735,030 - HP15_1635 0.18 +0.5
1,735,030 - HP15_1635 0.18 +0.5
1,735,222 + HP15_1635 0.32 +0.1
1,735,410 + HP15_1635 0.45 +0.5

Or see this region's nucleotide sequence