Strain Fitness in Marinobacter adhaerens HP15 around HP15_1455
Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,529,561 | + | HP15_1453 | 0.83 | -0.6 | |
1,529,668 | - | HP15_1453 | 0.89 | -1.0 | |
1,529,685 | + | +0.3 | |||
1,529,941 | + | -0.7 | |||
1,529,949 | - | +0.3 | |||
1,530,110 | + | HP15_1454 | 0.28 | -1.0 | |
1,530,208 | - | HP15_1454 | 0.48 | -0.4 | |
1,530,236 | + | HP15_1454 | 0.54 | +0.2 | |
1,530,460 | - | +0.5 | |||
1,530,482 | + | +1.1 | |||
1,530,579 | - | +1.2 | |||
1,530,739 | + | HP15_1455 | 0.17 | +0.4 | |
1,530,837 | + | HP15_1455 | 0.23 | +1.1 | |
1,530,870 | + | HP15_1455 | 0.25 | +0.6 | |
1,530,936 | - | +2.2 | |||
1,530,984 | + | HP15_1455 | 0.32 | +1.0 | |
1,531,287 | - | HP15_1455 | 0.51 | +1.1 | |
1,531,727 | - | HP15_1455 | 0.78 | +1.8 | |
1,531,766 | + | HP15_1455 | 0.81 | +0.9 | |
1,531,767 | + | HP15_1455 | 0.81 | +1.4 | |
1,531,947 | + | +0.4 | |||
1,532,057 | + | +0.8 | |||
1,532,057 | + | +0.4 | |||
1,532,065 | - | +0.8 | |||
1,532,065 | - | +1.1 | |||
1,532,262 | + | -0.0 | |||
1,532,371 | + | +2.0 | |||
1,532,581 | + | HP15_1456 | 0.27 | +1.6 | |
1,532,711 | + | HP15_1456 | 0.40 | +2.3 | |
1,532,895 | + | HP15_1456 | 0.58 | -0.5 | |
1,532,988 | - | HP15_1456 | 0.67 | +1.9 |
Or see this region's nucleotide sequence