Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1209 and HP15_1210 overlap by 14 nucleotides HP15_1210 and HP15_1211 are separated by 5 nucleotides HP15_1211 and HP15_1212 are separated by 64 nucleotides HP15_1212 and HP15_1213 are separated by 331 nucleotides
HP15_1209: HP15_1209 - glycosyltransferase involved in cell wall biogenesis, at 1,255,444 to 1,256,109
_1209
HP15_1210: HP15_1210 - conserved hypothetical protein, at 1,256,096 to 1,256,728
_1210
HP15_1211: HP15_1211 - protease III precursor, at 1,256,734 to 1,259,556
_1211
HP15_1212: HP15_1212 - conserved hypothetical protein, at 1,259,621 to 1,259,920
_1212
HP15_1213: HP15_1213 - short chain dehydrogenase, at 1,260,252 to 1,262,291
_1213
Position (kb)
1256
1257
1258
1259
1260 Strain fitness (log2 ratio)
-1
0
1 at 1255.946 kb on + strand, within HP15_1209 at 1256.146 kb on + strand at 1256.245 kb on + strand, within HP15_1210 at 1256.332 kb on + strand, within HP15_1210 at 1256.358 kb on + strand, within HP15_1210 at 1256.366 kb on - strand, within HP15_1210 at 1256.422 kb on - strand, within HP15_1210 at 1256.516 kb on + strand, within HP15_1210 at 1256.602 kb on - strand, within HP15_1210 at 1256.693 kb on + strand at 1256.729 kb on - strand at 1257.133 kb on + strand, within HP15_1211 at 1257.380 kb on + strand, within HP15_1211 at 1257.441 kb on - strand, within HP15_1211 at 1257.511 kb on + strand, within HP15_1211 at 1257.545 kb on + strand, within HP15_1211 at 1257.553 kb on - strand, within HP15_1211 at 1258.083 kb on + strand, within HP15_1211 at 1258.240 kb on + strand, within HP15_1211 at 1258.326 kb on - strand, within HP15_1211 at 1258.366 kb on - strand, within HP15_1211 at 1259.334 kb on + strand at 1259.361 kb on - strand at 1259.381 kb on + strand at 1259.680 kb on + strand, within HP15_1212 at 1259.870 kb on + strand, within HP15_1212 at 1259.870 kb on + strand, within HP15_1212 at 1259.878 kb on - strand, within HP15_1212 at 1259.915 kb on + strand at 1260.018 kb on + strand at 1260.284 kb on - strand at 1260.374 kb on + strand at 1260.403 kb on + strand at 1260.413 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 1,255,946 + HP15_1209 0.75 -1.0 1,256,146 + -0.5 1,256,245 + HP15_1210 0.24 +0.5 1,256,332 + HP15_1210 0.37 -0.5 1,256,358 + HP15_1210 0.41 -0.3 1,256,366 - HP15_1210 0.43 -0.3 1,256,422 - HP15_1210 0.52 +0.0 1,256,516 + HP15_1210 0.66 -0.9 1,256,602 - HP15_1210 0.80 -0.6 1,256,693 + -0.3 1,256,729 - -0.5 1,257,133 + HP15_1211 0.14 -1.5 1,257,380 + HP15_1211 0.23 -0.4 1,257,441 - HP15_1211 0.25 -0.5 1,257,511 + HP15_1211 0.28 -1.4 1,257,545 + HP15_1211 0.29 -0.9 1,257,553 - HP15_1211 0.29 +0.4 1,258,083 + HP15_1211 0.48 -0.6 1,258,240 + HP15_1211 0.53 +0.6 1,258,326 - HP15_1211 0.56 -0.8 1,258,366 - HP15_1211 0.58 -0.5 1,259,334 + -0.9 1,259,361 - -0.2 1,259,381 + -0.8 1,259,680 + HP15_1212 0.20 -0.7 1,259,870 + HP15_1212 0.83 +0.3 1,259,870 + HP15_1212 0.83 -0.5 1,259,878 - HP15_1212 0.86 -0.6 1,259,915 + -1.0 1,260,018 + +0.2 1,260,284 - +0.3 1,260,374 + +0.1 1,260,403 + +0.4 1,260,413 + +0.1
Or see this region's nucleotide sequence