Strain Fitness in Marinobacter adhaerens HP15 around HP15_1193
Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,226,174 | + | HP15_1191 | 0.68 | +0.9 | |
1,226,249 | - | HP15_1191 | 0.79 | -0.2 | |
1,226,317 | + | +0.6 | |||
1,226,394 | - | -0.1 | |||
1,226,500 | - | HP15_1192 | 0.14 | -0.1 | |
1,226,502 | - | HP15_1192 | 0.15 | +0.2 | |
1,226,623 | - | HP15_1192 | 0.35 | -0.2 | |
1,226,641 | + | HP15_1192 | 0.39 | -0.1 | |
1,226,726 | + | HP15_1192 | 0.53 | +0.4 | |
1,226,812 | - | HP15_1192 | 0.68 | +0.6 | |
1,226,931 | - | HP15_1192 | 0.89 | -1.2 | |
1,227,012 | + | -0.3 | |||
1,227,134 | + | +3.8 | |||
1,227,150 | + | +0.1 | |||
1,227,281 | + | HP15_1193 | 0.28 | -0.3 | |
1,227,323 | - | HP15_1193 | 0.34 | +0.3 | |
1,227,397 | - | HP15_1193 | 0.45 | +0.9 | |
1,227,442 | + | HP15_1193 | 0.52 | +2.4 | |
1,227,450 | - | HP15_1193 | 0.53 | -0.2 | |
1,227,557 | - | HP15_1193 | 0.69 | +0.5 | |
1,227,783 | - | +0.4 | |||
1,227,858 | - | -0.8 | |||
1,228,117 | - | +0.3 | |||
1,228,244 | - | -0.6 | |||
1,228,250 | - | -0.0 | |||
1,228,272 | - | +0.2 | |||
1,228,294 | - | +0.9 | |||
1,228,388 | + | HP15_1194 | 0.14 | -0.3 | |
1,228,389 | + | HP15_1194 | 0.14 | +0.2 | |
1,228,474 | + | HP15_1194 | 0.20 | +1.3 | |
1,228,613 | + | HP15_1194 | 0.28 | +0.2 | |
1,228,664 | + | HP15_1194 | 0.31 | -1.1 | |
1,228,687 | - | HP15_1194 | 0.32 | +0.9 |
Or see this region's nucleotide sequence