Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1050 and HP15_1051 are separated by 15 nucleotides HP15_1051 and HP15_1052 are separated by 217 nucleotides HP15_1052 and HP15_1053 are separated by 39 nucleotides HP15_1053 and HP15_1054 are separated by 45 nucleotides
HP15_1050: HP15_1050 - conserved hypothetical protein, at 1,071,325 to 1,071,795
_1050
HP15_1051: HP15_1051 - conserved hypothetical protein, at 1,071,811 to 1,072,188
_1051
HP15_1052: HP15_1052 - peptidase S16, lon domain-containing protein, at 1,072,406 to 1,074,813
_1052
HP15_1053: HP15_1053 - two component transcriptional regulator, LuxR family, at 1,074,853 to 1,075,479
_1053
HP15_1054: HP15_1054 - multi-sensor signal transduction histidine kinase, at 1,075,525 to 1,077,102
_1054
Position (kb)
1072
1073
1074
1075 Strain fitness (log2 ratio)
-2
-1
0
1 at 1071.413 kb on + strand, within HP15_1050 at 1071.431 kb on - strand, within HP15_1050 at 1071.439 kb on - strand, within HP15_1050 at 1071.478 kb on + strand, within HP15_1050 at 1071.478 kb on + strand, within HP15_1050 at 1071.486 kb on - strand, within HP15_1050 at 1071.571 kb on - strand, within HP15_1050 at 1071.631 kb on - strand, within HP15_1050 at 1071.764 kb on - strand at 1071.803 kb on + strand at 1071.852 kb on + strand, within HP15_1051 at 1071.864 kb on - strand, within HP15_1051 at 1071.935 kb on + strand, within HP15_1051 at 1071.964 kb on - strand, within HP15_1051 at 1071.984 kb on - strand, within HP15_1051 at 1072.070 kb on - strand, within HP15_1051 at 1072.227 kb on + strand at 1072.240 kb on + strand at 1072.350 kb on - strand at 1072.381 kb on + strand at 1072.429 kb on + strand at 1072.743 kb on - strand, within HP15_1052 at 1072.743 kb on - strand, within HP15_1052 at 1072.919 kb on + strand, within HP15_1052 at 1072.959 kb on + strand, within HP15_1052 at 1073.109 kb on + strand, within HP15_1052 at 1073.112 kb on - strand, within HP15_1052 at 1073.174 kb on - strand, within HP15_1052 at 1073.210 kb on + strand, within HP15_1052 at 1073.210 kb on + strand, within HP15_1052 at 1073.304 kb on + strand, within HP15_1052 at 1073.356 kb on - strand, within HP15_1052 at 1073.399 kb on - strand, within HP15_1052 at 1073.514 kb on - strand, within HP15_1052 at 1073.598 kb on + strand, within HP15_1052 at 1073.606 kb on - strand, within HP15_1052 at 1073.606 kb on - strand, within HP15_1052 at 1073.772 kb on + strand, within HP15_1052 at 1073.815 kb on + strand, within HP15_1052 at 1073.851 kb on + strand, within HP15_1052 at 1073.861 kb on + strand, within HP15_1052 at 1073.919 kb on - strand, within HP15_1052 at 1073.947 kb on + strand, within HP15_1052 at 1073.947 kb on + strand, within HP15_1052 at 1073.975 kb on - strand, within HP15_1052 at 1074.000 kb on - strand, within HP15_1052 at 1074.094 kb on + strand, within HP15_1052 at 1074.099 kb on + strand, within HP15_1052 at 1074.123 kb on - strand, within HP15_1052 at 1074.181 kb on - strand, within HP15_1052 at 1074.200 kb on - strand, within HP15_1052 at 1074.209 kb on + strand, within HP15_1052 at 1074.234 kb on + strand, within HP15_1052 at 1074.248 kb on - strand, within HP15_1052 at 1074.335 kb on - strand, within HP15_1052 at 1074.347 kb on + strand, within HP15_1052 at 1074.398 kb on - strand, within HP15_1052 at 1074.492 kb on - strand, within HP15_1052 at 1074.530 kb on - strand, within HP15_1052 at 1074.685 kb on + strand at 1074.704 kb on + strand at 1074.709 kb on + strand at 1074.838 kb on + strand at 1075.223 kb on + strand, within HP15_1053 at 1075.231 kb on - strand, within HP15_1053 at 1075.249 kb on - strand, within HP15_1053 at 1075.387 kb on - strand, within HP15_1053 at 1075.452 kb on - strand at 1075.659 kb on + strand at 1075.730 kb on + strand, within HP15_1054 at 1075.738 kb on - strand, within HP15_1054 at 1075.757 kb on - strand, within HP15_1054
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 1,071,413 + HP15_1050 0.19 -0.6 1,071,431 - HP15_1050 0.23 +0.2 1,071,439 - HP15_1050 0.24 +0.4 1,071,478 + HP15_1050 0.32 -1.1 1,071,478 + HP15_1050 0.32 +0.1 1,071,486 - HP15_1050 0.34 -0.2 1,071,571 - HP15_1050 0.52 +0.1 1,071,631 - HP15_1050 0.65 -0.6 1,071,764 - -1.1 1,071,803 + +0.9 1,071,852 + HP15_1051 0.11 +0.8 1,071,864 - HP15_1051 0.14 +0.3 1,071,935 + HP15_1051 0.33 -0.3 1,071,964 - HP15_1051 0.40 +0.1 1,071,984 - HP15_1051 0.46 +1.3 1,072,070 - HP15_1051 0.69 +0.3 1,072,227 + +0.6 1,072,240 + +0.5 1,072,350 - +0.4 1,072,381 + +0.4 1,072,429 + +0.6 1,072,743 - HP15_1052 0.14 +0.1 1,072,743 - HP15_1052 0.14 +1.0 1,072,919 + HP15_1052 0.21 +0.8 1,072,959 + HP15_1052 0.23 +0.8 1,073,109 + HP15_1052 0.29 -0.8 1,073,112 - HP15_1052 0.29 +1.0 1,073,174 - HP15_1052 0.32 +0.9 1,073,210 + HP15_1052 0.33 +0.3 1,073,210 + HP15_1052 0.33 -1.2 1,073,304 + HP15_1052 0.37 -0.4 1,073,356 - HP15_1052 0.39 +0.9 1,073,399 - HP15_1052 0.41 +0.8 1,073,514 - HP15_1052 0.46 +1.5 1,073,598 + HP15_1052 0.50 +0.4 1,073,606 - HP15_1052 0.50 +0.6 1,073,606 - HP15_1052 0.50 +0.4 1,073,772 + HP15_1052 0.57 +0.9 1,073,815 + HP15_1052 0.59 -0.3 1,073,851 + HP15_1052 0.60 -0.5 1,073,861 + HP15_1052 0.60 +0.1 1,073,919 - HP15_1052 0.63 +0.8 1,073,947 + HP15_1052 0.64 -0.8 1,073,947 + HP15_1052 0.64 +0.1 1,073,975 - HP15_1052 0.65 -0.0 1,074,000 - HP15_1052 0.66 +0.5 1,074,094 + HP15_1052 0.70 -1.0 1,074,099 + HP15_1052 0.70 -2.4 1,074,123 - HP15_1052 0.71 +0.7 1,074,181 - HP15_1052 0.74 +0.9 1,074,200 - HP15_1052 0.75 +1.3 1,074,209 + HP15_1052 0.75 +1.5 1,074,234 + HP15_1052 0.76 +0.8 1,074,248 - HP15_1052 0.76 +0.9 1,074,335 - HP15_1052 0.80 +1.1 1,074,347 + HP15_1052 0.81 -0.0 1,074,398 - HP15_1052 0.83 +1.3 1,074,492 - HP15_1052 0.87 +1.2 1,074,530 - HP15_1052 0.88 +1.6 1,074,685 + -1.4 1,074,704 + -0.0 1,074,709 + -0.5 1,074,838 + +1.6 1,075,223 + HP15_1053 0.59 -0.6 1,075,231 - HP15_1053 0.60 +0.2 1,075,249 - HP15_1053 0.63 +0.5 1,075,387 - HP15_1053 0.85 +0.2 1,075,452 - +0.5 1,075,659 + +1.1 1,075,730 + HP15_1054 0.13 +0.8 1,075,738 - HP15_1054 0.13 +0.2 1,075,757 - HP15_1054 0.15 -0.0
Or see this region's nucleotide sequence