Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0071

Experiment: MoYLS4 with Mercury 10uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVUA0070 and DVUA0071 are separated by 92 nucleotidesDVUA0071 and DVUA0072 are separated by 128 nucleotides DVUA0070: DVUA0070 - conserved domain protein (TIGR), at 92,091 to 94,022 DVUA0070 DVUA0071: DVUA0071 - glycosyl transferase, group 1/2 family protein (TIGR), at 94,115 to 96,271 DVUA0071 DVUA0072: DVUA0072 - glycosyl transferase, group 1 family protein (TIGR), at 96,400 to 97,737 DVUA0072 Position (kb) 94 95 96 97Strain fitness (log2 ratio) -1 0 1 2at 94.017 kb on + strandat 94.160 kb on + strandat 94.231 kb on + strandat 94.252 kb on + strandat 94.383 kb on + strand, within DVUA0071at 94.678 kb on + strand, within DVUA0071at 94.714 kb on + strand, within DVUA0071at 94.979 kb on - strand, within DVUA0071at 95.071 kb on + strand, within DVUA0071at 95.089 kb on - strand, within DVUA0071at 95.322 kb on + strand, within DVUA0071at 95.330 kb on - strand, within DVUA0071at 95.511 kb on + strand, within DVUA0071at 95.975 kb on + strand, within DVUA0071at 96.393 kb on - strandat 96.401 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM
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94,017 + +1.0
94,160 + +1.0
94,231 + +1.0
94,252 + +1.6
94,383 + DVUA0071 0.12 -1.1
94,678 + DVUA0071 0.26 +2.6
94,714 + DVUA0071 0.28 +1.0
94,979 - DVUA0071 0.40 -1.0
95,071 + DVUA0071 0.44 -1.0
95,089 - DVUA0071 0.45 +1.6
95,322 + DVUA0071 0.56 +0.3
95,330 - DVUA0071 0.56 +0.3
95,511 + DVUA0071 0.65 +1.0
95,975 + DVUA0071 0.86 +1.0
96,393 - -1.5
96,401 - -1.3

Or see this region's nucleotide sequence