Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2071

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
2,592,103	+		BT_2070	0.30	-1.3
2,592,119	+		BT_2070	0.31	-0.8
2,592,119	+		BT_2070	0.31	+2.0
2,592,124	+		BT_2070	0.31	+1.0
2,592,154	+		BT_2070	0.33	-1.0
2,592,155	-		BT_2070	0.33	+0.4
2,592,155	-		BT_2070	0.33	-2.3
2,592,155	-		BT_2070	0.33	-1.7
2,592,158	+		BT_2070	0.34	-0.0
2,592,159	-		BT_2070	0.34	+0.6
2,592,162	+		BT_2070	0.34	-0.0
2,592,192	-		BT_2070	0.36	-1.5
2,592,216	-		BT_2070	0.38	-1.8
2,592,289	+		BT_2070	0.44	-0.0
2,592,289	+		BT_2070	0.44	-1.2
2,592,289	+		BT_2070	0.44	-2.3
2,592,290	-		BT_2070	0.44	-0.0
2,592,293	+		BT_2070	0.44	-1.3
2,592,294	-		BT_2070	0.44	-1.8
2,592,294	-		BT_2070	0.44	-0.6
2,592,422	+		BT_2070	0.54	-2.2
2,592,423	-		BT_2070	0.54	-1.1
2,592,509	+		BT_2070	0.61	-1.6
2,592,510	-		BT_2070	0.61	+0.4
2,592,512	-		BT_2070	0.61	-0.0
2,592,545	+		BT_2070	0.63	-1.1
2,592,545	+		BT_2070	0.63	-1.0
2,592,585	-		BT_2070	0.66	-1.2
2,592,638	+		BT_2070	0.70	-0.6
2,592,701	+		BT_2070	0.75	+1.0
2,592,702	-		BT_2070	0.75	-1.3
2,592,890	+		BT_2070	0.90	+1.6
2,592,903	+				-0.9
2,592,903	+				-1.7
2,592,936	+				-1.3
2,592,937	-				-1.6
2,593,048	+				-4.4
2,593,048	+				-3.0
2,593,048	+				-0.6
2,593,065	-				-1.3
2,593,065	-				-1.3
2,593,075	+				-0.4
2,593,131	+				-1.4
2,593,143	+				-1.2
2,593,144	-				-0.3
2,593,247	+		BT2071	0.13	+2.0
2,593,368	+		BT2071	0.24	+1.0
2,593,368	+		BT2071	0.24	+1.0
2,593,369	-		BT2071	0.24	-1.0
2,593,428	-		BT2071	0.29	-1.0
2,593,463	+		BT2071	0.32	+1.0
2,593,486	-		BT2071	0.34	-1.7
2,593,784	+		BT2071	0.59	-0.8
2,593,785	-		BT2071	0.59	-0.8
2,593,832	+		BT2071	0.63	-2.3
2,593,832	+		BT2071	0.63	-1.8
2,593,832	+		BT2071	0.63	-1.5
2,593,833	-		BT2071	0.63	+1.0
2,593,833	-		BT2071	0.63	+1.0
2,593,834	+		BT2071	0.63	-2.2
2,593,835	-		BT2071	0.63	-1.8
2,593,835	-		BT2071	0.63	-2.2
2,593,835	-		BT2071	0.63	+1.0
2,593,835	-		BT2071	0.63	-1.2
2,593,837	-		BT2071	0.63	-1.3
2,593,837	-		BT2071	0.63	+0.7
2,593,837	-		BT2071	0.63	-0.8
2,593,846	-		BT2071	0.64	-0.0
2,594,211	+				-2.0
2,594,213	+				-0.7
2,594,213	+				-0.8
2,594,213	+				-0.6
2,594,214	-				-1.9
2,594,248	-				-0.0
2,594,248	-				-0.6
2,594,266	+				-1.3
2,594,347	+				-0.9
2,594,348	-				-2.5
2,594,351	+				-2.5
2,594,351	+				-1.2
2,594,351	+				-1.5
2,594,352	-				-1.3
2,594,499	-				-0.9
2,594,702	-		BT2072	0.18	-1.3
2,594,766	+		BT2072	0.21	-1.3
2,594,772	-		BT2072	0.21	-1.8
2,594,843	+		BT2072	0.25	-0.4
2,594,877	-		BT2072	0.26	-1.3
2,594,883	+		BT2072	0.26	-0.8
2,594,885	+		BT2072	0.26	-1.3
2,594,981	+		BT2072	0.31	-0.7
2,595,239	+		BT2072	0.42	-0.0