Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0046 and DVUA0047 are separated by 75 nucleotides DVUA0047 and DVUA0048 are separated by 54 nucleotides
DVUA0046: DVUA0046 - glycosyl transferase, group 2 family protein (TIGR), at 55,465 to 56,913
DVUA0046
DVUA0047: DVUA0047 - hypothetical protein (TIGR), at 56,989 to 58,305
DVUA0047
DVUA0048: DVUA0048 - exopolysaccharide production protein, putative (TIGR), at 58,360 to 59,757
DVUA0048
Position (kb) 56
57
58
59 Strain fitness (log2 ratio) -1
0
1
2 at 56.025 kb on + strand, within DVUA0046 at 56.162 kb on + strand, within DVUA0046 at 56.170 kb on - strand, within DVUA0046 at 56.229 kb on - strand, within DVUA0046 at 56.274 kb on + strand, within DVUA0046 at 56.274 kb on + strand, within DVUA0046 at 56.279 kb on + strand, within DVUA0046 at 56.279 kb on + strand, within DVUA0046 at 56.282 kb on + strand, within DVUA0046 at 56.356 kb on + strand, within DVUA0046 at 56.397 kb on + strand, within DVUA0046 at 56.635 kb on + strand, within DVUA0046 at 56.635 kb on + strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.689 kb on - strand, within DVUA0046 at 56.710 kb on + strand, within DVUA0046 at 56.785 kb on + strand at 56.785 kb on + strand at 56.823 kb on - strand at 56.823 kb on - strand at 56.890 kb on - strand at 56.971 kb on + strand at 57.230 kb on - strand, within DVUA0047 at 57.299 kb on - strand, within DVUA0047 at 57.526 kb on + strand, within DVUA0047 at 57.526 kb on + strand, within DVUA0047 at 57.562 kb on - strand, within DVUA0047 at 57.563 kb on - strand, within DVUA0047 at 57.611 kb on + strand, within DVUA0047 at 57.631 kb on + strand, within DVUA0047 at 57.736 kb on - strand, within DVUA0047 at 57.836 kb on - strand, within DVUA0047 at 57.853 kb on - strand, within DVUA0047 at 57.897 kb on - strand, within DVUA0047 at 57.897 kb on - strand, within DVUA0047 at 57.994 kb on + strand, within DVUA0047 at 58.137 kb on - strand, within DVUA0047 at 58.184 kb on + strand at 58.307 kb on - strand at 58.307 kb on - strand at 58.392 kb on + strand at 58.400 kb on - strand at 58.409 kb on + strand at 58.417 kb on - strand at 58.422 kb on - strand at 58.443 kb on - strand at 58.534 kb on - strand, within DVUA0048 at 58.550 kb on - strand, within DVUA0048 at 58.636 kb on + strand, within DVUA0048 at 58.644 kb on - strand, within DVUA0048 at 58.644 kb on - strand, within DVUA0048 at 58.793 kb on + strand, within DVUA0048 at 58.827 kb on + strand, within DVUA0048 at 58.918 kb on - strand, within DVUA0048 at 58.933 kb on + strand, within DVUA0048 at 58.941 kb on - strand, within DVUA0048 at 58.941 kb on - strand, within DVUA0048 at 58.954 kb on + strand, within DVUA0048 at 59.033 kb on - strand, within DVUA0048 at 59.034 kb on - strand, within DVUA0048 at 59.059 kb on + strand, within DVUA0048 at 59.091 kb on + strand, within DVUA0048 at 59.135 kb on - strand, within DVUA0048 at 59.219 kb on - strand, within DVUA0048 at 59.233 kb on + strand, within DVUA0048 at 59.235 kb on + strand, within DVUA0048 at 59.289 kb on + strand, within DVUA0048
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 56,025 + DVUA0046 0.39 -0.4 56,162 + DVUA0046 0.48 -0.2 56,170 - DVUA0046 0.49 -0.2 56,229 - DVUA0046 0.53 -1.3 56,274 + DVUA0046 0.56 +1.2 56,274 + DVUA0046 0.56 +0.7 56,279 + DVUA0046 0.56 -0.2 56,279 + DVUA0046 0.56 -0.1 56,282 + DVUA0046 0.56 +0.7 56,356 + DVUA0046 0.61 -0.1 56,397 + DVUA0046 0.64 -0.4 56,635 + DVUA0046 0.81 -0.3 56,635 + DVUA0046 0.81 -0.3 56,643 - DVUA0046 0.81 -1.7 56,643 - DVUA0046 0.81 -0.3 56,643 - DVUA0046 0.81 +1.2 56,689 - DVUA0046 0.84 -0.0 56,710 + DVUA0046 0.86 -0.3 56,785 + -0.4 56,785 + -1.7 56,823 - -0.2 56,823 - -0.1 56,890 - +0.3 56,971 + +0.3 57,230 - DVUA0047 0.18 +0.6 57,299 - DVUA0047 0.24 -0.0 57,526 + DVUA0047 0.41 -0.7 57,526 + DVUA0047 0.41 +1.1 57,562 - DVUA0047 0.44 +0.2 57,563 - DVUA0047 0.44 -0.1 57,611 + DVUA0047 0.47 -0.1 57,631 + DVUA0047 0.49 +0.0 57,736 - DVUA0047 0.57 -0.7 57,836 - DVUA0047 0.64 +0.1 57,853 - DVUA0047 0.66 -0.6 57,897 - DVUA0047 0.69 +0.2 57,897 - DVUA0047 0.69 +1.5 57,994 + DVUA0047 0.76 +1.1 58,137 - DVUA0047 0.87 -0.6 58,184 + -0.8 58,307 - -0.2 58,307 - +0.7 58,392 + -0.0 58,400 - -1.2 58,409 + +2.2 58,417 - -0.9 58,422 - +0.1 58,443 - -0.4 58,534 - DVUA0048 0.12 -1.4 58,550 - DVUA0048 0.14 +0.0 58,636 + DVUA0048 0.20 -1.3 58,644 - DVUA0048 0.20 -0.3 58,644 - DVUA0048 0.20 +1.3 58,793 + DVUA0048 0.31 +0.4 58,827 + DVUA0048 0.33 -0.2 58,918 - DVUA0048 0.40 +0.1 58,933 + DVUA0048 0.41 -0.1 58,941 - DVUA0048 0.42 -0.0 58,941 - DVUA0048 0.42 +0.5 58,954 + DVUA0048 0.42 -0.1 59,033 - DVUA0048 0.48 -1.1 59,034 - DVUA0048 0.48 -0.3 59,059 + DVUA0048 0.50 +0.0 59,091 + DVUA0048 0.52 -0.2 59,135 - DVUA0048 0.55 +1.4 59,219 - DVUA0048 0.61 -0.3 59,233 + DVUA0048 0.62 +0.4 59,235 + DVUA0048 0.63 +0.2 59,289 + DVUA0048 0.66 -0.0
Or see this region's nucleotide sequence