Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2856 and DVU2857 are separated by 199 nucleotides DVU2857 and DVU2858 overlap by 1 nucleotides DVU2858 and DVU2859 are separated by 49 nucleotides DVU2859 and DVU2860 are separated by 3 nucleotides DVU2860 and DVU2861 overlap by 17 nucleotides DVU2861 and DVU2862 overlap by 4 nucleotides
DVU2856: DVU2856 - conserved domain protein (TIGR), at 2,956,426 to 2,957,916
DVU2856
DVU2857: DVU2857 - conserved hypothetical protein (TIGR), at 2,958,116 to 2,958,376
DVU2857
DVU2858: DVU2858 - tail tube protein, putative (TIGR), at 2,958,376 to 2,958,741
DVU2858
DVU2859: DVU2859 - tail sheath protein, putative (TIGR), at 2,958,791 to 2,960,254
DVU2859
DVU2860: DVU2860 - conserved hypothetical protein (TIGR), at 2,960,258 to 2,960,449
DVU2860
DVU2861: DVU2861 - hypothetical protein (TIGR), at 2,960,433 to 2,960,990
DVU2861
DVU2862: DVU2862 - hypothetical protein (TIGR), at 2,960,987 to 2,961,313
DVU2862
Position (kb)
2958
2959
2960
2961 Strain fitness (log2 ratio)
-2
-1
0
1 at 2958.121 kb on + strand at 2959.157 kb on + strand, within DVU2859 at 2959.189 kb on - strand, within DVU2859 at 2959.453 kb on + strand, within DVU2859 at 2959.930 kb on + strand, within DVU2859 at 2959.933 kb on - strand, within DVU2859 at 2959.988 kb on + strand, within DVU2859 at 2960.030 kb on - strand, within DVU2859 at 2960.703 kb on + strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 2,958,121 + -1.7 2,959,157 + DVU2859 0.25 +0.0 2,959,189 - DVU2859 0.27 -0.0 2,959,453 + DVU2859 0.45 +0.3 2,959,930 + DVU2859 0.78 +0.7 2,959,933 - DVU2859 0.78 -1.5 2,959,988 + DVU2859 0.82 -0.3 2,960,030 - DVU2859 0.85 +0.1 2,960,703 + DVU2861 0.48 +0.1 2,960,925 - DVU2861 0.88 +0.4 2,960,925 - DVU2861 0.88 -2.2
Or see this region's nucleotide sequence