Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2831 and DVU2832 overlap by 14 nucleotides DVU2832 and DVU2833 are separated by 157 nucleotides DVU2833 and DVU2835 are separated by 397 nucleotides DVU2835 and DVU2836 are separated by 96 nucleotides
DVU2831: DVU2831 - hypothetical protein (TIGR), at 2,938,713 to 2,938,907
DVU2831
DVU2832: DVU2832 - transcriptional regulator cII, putative (TIGR), at 2,938,894 to 2,939,355
DVU2832
DVU2833: DVU2833 - hypothetical protein (TIGR), at 2,939,513 to 2,939,842
DVU2833
DVU2835: DVU2835 - transcriptional regulator, putative (TIGR), at 2,940,240 to 2,940,512
DVU2835
DVU2836: DVU2836 - hypothetical protein (TIGR), at 2,940,609 to 2,941,055
DVU2836
Position (kb)
2939
2940 Strain fitness (log2 ratio)
-1
0
1
2 at 2938.519 kb on + strand at 2938.545 kb on - strand at 2938.569 kb on + strand at 2938.569 kb on + strand at 2938.629 kb on + strand at 2938.629 kb on + strand at 2938.629 kb on + strand at 2938.629 kb on + strand at 2938.629 kb on + strand at 2938.637 kb on - strand at 2938.822 kb on + strand, within DVU2831 at 2938.840 kb on - strand, within DVU2831 at 2938.911 kb on - strand at 2938.915 kb on - strand at 2938.930 kb on - strand at 2938.950 kb on - strand, within DVU2832 at 2938.953 kb on + strand, within DVU2832 at 2938.975 kb on - strand, within DVU2832 at 2939.086 kb on - strand, within DVU2832 at 2939.086 kb on - strand, within DVU2832 at 2939.103 kb on + strand, within DVU2832 at 2939.125 kb on + strand, within DVU2832 at 2939.125 kb on + strand, within DVU2832 at 2939.125 kb on + strand, within DVU2832 at 2939.125 kb on + strand, within DVU2832 at 2939.125 kb on + strand, within DVU2832 at 2939.133 kb on - strand, within DVU2832 at 2939.133 kb on - strand, within DVU2832 at 2939.140 kb on - strand, within DVU2832 at 2939.216 kb on + strand, within DVU2832 at 2939.217 kb on + strand, within DVU2832 at 2939.249 kb on + strand, within DVU2832 at 2939.257 kb on - strand, within DVU2832 at 2939.520 kb on + strand at 2939.600 kb on + strand, within DVU2833 at 2939.636 kb on - strand, within DVU2833 at 2939.714 kb on - strand, within DVU2833 at 2939.797 kb on + strand, within DVU2833 at 2939.808 kb on + strand, within DVU2833 at 2939.808 kb on + strand, within DVU2833 at 2939.823 kb on + strand at 2939.856 kb on + strand at 2939.899 kb on + strand at 2939.909 kb on - strand at 2939.909 kb on - strand at 2939.914 kb on - strand at 2939.914 kb on - strand at 2939.914 kb on - strand at 2939.942 kb on - strand at 2939.944 kb on - strand at 2939.990 kb on - strand at 2939.999 kb on + strand at 2940.007 kb on - strand at 2940.049 kb on + strand at 2940.151 kb on + strand at 2940.155 kb on - strand at 2940.168 kb on + strand at 2940.168 kb on + strand at 2940.185 kb on - strand at 2940.190 kb on + strand at 2940.192 kb on - strand at 2940.208 kb on - strand at 2940.288 kb on - strand, within DVU2835 at 2940.288 kb on - strand, within DVU2835 at 2940.320 kb on + strand, within DVU2835 at 2940.338 kb on - strand, within DVU2835 at 2940.403 kb on - strand, within DVU2835
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 2,938,519 + -0.6 2,938,545 - -0.4 2,938,569 + -0.5 2,938,569 + -0.3 2,938,629 + -0.3 2,938,629 + +0.1 2,938,629 + +0.3 2,938,629 + -0.1 2,938,629 + +0.1 2,938,637 - -0.0 2,938,822 + DVU2831 0.56 +0.1 2,938,840 - DVU2831 0.65 -0.3 2,938,911 - -0.5 2,938,915 - +0.0 2,938,930 - +0.0 2,938,950 - DVU2832 0.12 +0.6 2,938,953 + DVU2832 0.13 -0.8 2,938,975 - DVU2832 0.18 +0.8 2,939,086 - DVU2832 0.42 -0.6 2,939,086 - DVU2832 0.42 +0.6 2,939,103 + DVU2832 0.45 -0.5 2,939,125 + DVU2832 0.50 +0.8 2,939,125 + DVU2832 0.50 -0.0 2,939,125 + DVU2832 0.50 +0.2 2,939,125 + DVU2832 0.50 -0.2 2,939,125 + DVU2832 0.50 -0.2 2,939,133 - DVU2832 0.52 -1.3 2,939,133 - DVU2832 0.52 -0.3 2,939,140 - DVU2832 0.53 -0.0 2,939,216 + DVU2832 0.70 -0.4 2,939,217 + DVU2832 0.70 -0.3 2,939,249 + DVU2832 0.77 +1.0 2,939,257 - DVU2832 0.79 -0.3 2,939,520 + -0.1 2,939,600 + DVU2833 0.26 +0.1 2,939,636 - DVU2833 0.37 -0.2 2,939,714 - DVU2833 0.61 +0.0 2,939,797 + DVU2833 0.86 -0.1 2,939,808 + DVU2833 0.89 +0.7 2,939,808 + DVU2833 0.89 -0.1 2,939,823 + +0.0 2,939,856 + -1.3 2,939,899 + -0.9 2,939,909 - +0.1 2,939,909 - -1.6 2,939,914 - +0.5 2,939,914 - +0.6 2,939,914 - -1.3 2,939,942 - +0.9 2,939,944 - +0.0 2,939,990 - +0.1 2,939,999 + -0.2 2,940,007 - +0.4 2,940,049 + -0.8 2,940,151 + +2.4 2,940,155 - -0.0 2,940,168 + +0.1 2,940,168 + +0.0 2,940,185 - -0.0 2,940,190 + -0.9 2,940,192 - +1.0 2,940,208 - -0.3 2,940,288 - DVU2835 0.18 +0.3 2,940,288 - DVU2835 0.18 +0.1 2,940,320 + DVU2835 0.29 +0.2 2,940,338 - DVU2835 0.36 -0.1 2,940,403 - DVU2835 0.60 +0.1
Or see this region's nucleotide sequence