Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2356 and DVU2357 are separated by 295 nucleotides DVU2357 and DORF41147 are separated by 40 nucleotides DORF41147 and DVU2359 are separated by 377 nucleotides
DVU2356: DVU2356 - membrane protein, putative (TIGR), at 2,453,277 to 2,454,704
DVU2356
DVU2357: DVU2357 - HD domain protein (TIGR), at 2,455,000 to 2,456,109
DVU2357
DORF41147: DORF41147 - no description, at 2,456,150 to 2,456,278
DORF41147
DVU2359: DVU2359 - sigma-54 dependent transcriptional regulator (TIGR), at 2,456,656 to 2,458,311
DVU2359
Position (kb)
2454
2455
2456
2457 Strain fitness (log2 ratio)
-2
-1
0
1 at 2454.094 kb on + strand, within DVU2356 at 2454.094 kb on + strand, within DVU2356 at 2454.146 kb on - strand, within DVU2356 at 2454.158 kb on - strand, within DVU2356 at 2454.158 kb on - strand, within DVU2356 at 2454.217 kb on - strand, within DVU2356 at 2454.329 kb on + strand, within DVU2356 at 2454.329 kb on + strand, within DVU2356 at 2454.329 kb on + strand, within DVU2356 at 2454.337 kb on - strand, within DVU2356 at 2454.383 kb on + strand, within DVU2356 at 2454.391 kb on - strand, within DVU2356 at 2454.397 kb on - strand, within DVU2356 at 2454.504 kb on + strand, within DVU2356 at 2454.541 kb on + strand, within DVU2356 at 2454.547 kb on - strand, within DVU2356 at 2454.600 kb on + strand at 2454.711 kb on + strand at 2454.727 kb on - strand at 2454.732 kb on - strand at 2454.813 kb on - strand at 2454.894 kb on - strand at 2455.077 kb on - strand at 2455.091 kb on + strand at 2455.403 kb on + strand, within DVU2357 at 2455.403 kb on + strand, within DVU2357 at 2455.534 kb on + strand, within DVU2357 at 2455.570 kb on + strand, within DVU2357 at 2455.637 kb on + strand, within DVU2357 at 2455.667 kb on - strand, within DVU2357 at 2455.682 kb on + strand, within DVU2357 at 2455.922 kb on - strand, within DVU2357 at 2456.065 kb on + strand at 2456.073 kb on - strand at 2456.103 kb on + strand at 2456.111 kb on - strand at 2456.128 kb on - strand at 2456.258 kb on + strand, within DORF41147 at 2456.266 kb on - strand at 2456.324 kb on + strand at 2456.324 kb on + strand at 2456.353 kb on - strand at 2456.380 kb on - strand at 2456.411 kb on - strand at 2456.736 kb on + strand at 2456.741 kb on - strand at 2456.744 kb on - strand at 2456.746 kb on + strand at 2456.754 kb on - strand at 2456.798 kb on - strand at 2456.806 kb on + strand at 2456.814 kb on - strand at 2456.877 kb on + strand, within DVU2359 at 2456.951 kb on + strand, within DVU2359 at 2456.998 kb on + strand, within DVU2359 at 2457.095 kb on - strand, within DVU2359
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 2,454,094 + DVU2356 0.57 +0.6 2,454,094 + DVU2356 0.57 +0.1 2,454,146 - DVU2356 0.61 +1.0 2,454,158 - DVU2356 0.62 -1.3 2,454,158 - DVU2356 0.62 -0.0 2,454,217 - DVU2356 0.66 +0.8 2,454,329 + DVU2356 0.74 -0.4 2,454,329 + DVU2356 0.74 -0.1 2,454,329 + DVU2356 0.74 -0.1 2,454,337 - DVU2356 0.74 -0.2 2,454,383 + DVU2356 0.77 -0.1 2,454,391 - DVU2356 0.78 +0.1 2,454,397 - DVU2356 0.78 +0.4 2,454,504 + DVU2356 0.86 +0.6 2,454,541 + DVU2356 0.89 -0.3 2,454,547 - DVU2356 0.89 -0.7 2,454,600 + +0.0 2,454,711 + -1.5 2,454,727 - -0.8 2,454,732 - -0.2 2,454,813 - +1.1 2,454,894 - -0.1 2,455,077 - -1.8 2,455,091 + -0.1 2,455,403 + DVU2357 0.36 -1.0 2,455,403 + DVU2357 0.36 -2.2 2,455,534 + DVU2357 0.48 -1.4 2,455,570 + DVU2357 0.51 -0.5 2,455,637 + DVU2357 0.57 -1.8 2,455,667 - DVU2357 0.60 -0.8 2,455,682 + DVU2357 0.61 -1.2 2,455,922 - DVU2357 0.83 -0.1 2,456,065 + +0.7 2,456,073 - +0.4 2,456,103 + +0.2 2,456,111 - -0.3 2,456,128 - -0.5 2,456,258 + DORF41147 0.84 -0.1 2,456,266 - +0.9 2,456,324 + +0.1 2,456,324 + +1.4 2,456,353 - +0.1 2,456,380 - +0.1 2,456,411 - +0.1 2,456,736 + -0.5 2,456,741 - +0.3 2,456,744 - -0.7 2,456,746 + -2.6 2,456,754 - -0.9 2,456,798 - -1.6 2,456,806 + -0.4 2,456,814 - -0.7 2,456,877 + DVU2359 0.13 +0.0 2,456,951 + DVU2359 0.18 +0.3 2,456,998 + DVU2359 0.21 -0.9 2,457,095 - DVU2359 0.27 -1.5
Or see this region's nucleotide sequence