Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2168 and DVU2169 are separated by 10 nucleotides DVU2169 and DVU2170 are separated by 3 nucleotides
DVU2168: DVU2168 - major head protein (TIGR), at 2,265,579 to 2,266,604
DVU2168
DVU2169: DVU2169 - conserved hypothetical protein (TIGR), at 2,266,615 to 2,266,983
DVU2169
DVU2170: DVU2170 - minor capsid protein C (TIGR), at 2,266,987 to 2,268,207
DVU2170
Position (kb)
2266
2267 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2265.652 kb on + strand at 2265.812 kb on + strand, within DVU2168 at 2265.820 kb on - strand, within DVU2168 at 2265.975 kb on - strand, within DVU2168 at 2266.094 kb on + strand, within DVU2168 at 2266.102 kb on - strand, within DVU2168 at 2266.102 kb on - strand, within DVU2168 at 2266.167 kb on + strand, within DVU2168 at 2266.189 kb on - strand, within DVU2168 at 2266.232 kb on + strand, within DVU2168 at 2266.291 kb on + strand, within DVU2168 at 2266.306 kb on + strand, within DVU2168 at 2266.306 kb on + strand, within DVU2168 at 2266.306 kb on + strand, within DVU2168 at 2266.314 kb on - strand, within DVU2168 at 2266.314 kb on - strand, within DVU2168 at 2266.332 kb on - strand, within DVU2168 at 2266.501 kb on + strand, within DVU2168 at 2266.509 kb on - strand at 2266.693 kb on + strand, within DVU2169 at 2266.728 kb on + strand, within DVU2169 at 2266.736 kb on + strand, within DVU2169 at 2266.744 kb on - strand, within DVU2169 at 2266.855 kb on + strand, within DVU2169 at 2266.861 kb on + strand, within DVU2169 at 2266.863 kb on - strand, within DVU2169 at 2266.863 kb on - strand, within DVU2169 at 2266.906 kb on - strand, within DVU2169 at 2266.985 kb on + strand at 2266.992 kb on - strand at 2267.003 kb on + strand at 2267.003 kb on + strand at 2267.011 kb on - strand at 2267.011 kb on - strand at 2267.022 kb on + strand at 2267.059 kb on - strand at 2267.073 kb on - strand at 2267.078 kb on + strand at 2267.128 kb on - strand, within DVU2170 at 2267.128 kb on - strand, within DVU2170 at 2267.128 kb on - strand, within DVU2170 at 2267.135 kb on + strand, within DVU2170 at 2267.221 kb on - strand, within DVU2170 at 2267.221 kb on - strand, within DVU2170 at 2267.256 kb on + strand, within DVU2170 at 2267.380 kb on - strand, within DVU2170 at 2267.503 kb on - strand, within DVU2170 at 2267.528 kb on + strand, within DVU2170 at 2267.620 kb on - strand, within DVU2170 at 2267.674 kb on + strand, within DVU2170 at 2267.674 kb on + strand, within DVU2170 at 2267.682 kb on - strand, within DVU2170 at 2267.713 kb on - strand, within DVU2170 at 2267.719 kb on + strand, within DVU2170 at 2267.727 kb on - strand, within DVU2170 at 2267.727 kb on - strand, within DVU2170 at 2267.727 kb on - strand, within DVU2170 at 2267.793 kb on + strand, within DVU2170 at 2267.793 kb on + strand, within DVU2170 at 2267.879 kb on - strand, within DVU2170 at 2267.973 kb on + strand, within DVU2170 at 2267.976 kb on - strand, within DVU2170
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 2,265,652 + -0.7 2,265,812 + DVU2168 0.23 +0.5 2,265,820 - DVU2168 0.23 -1.7 2,265,975 - DVU2168 0.39 -0.6 2,266,094 + DVU2168 0.50 -0.4 2,266,102 - DVU2168 0.51 +0.2 2,266,102 - DVU2168 0.51 -0.5 2,266,167 + DVU2168 0.57 +0.0 2,266,189 - DVU2168 0.59 -0.1 2,266,232 + DVU2168 0.64 +0.2 2,266,291 + DVU2168 0.69 -0.5 2,266,306 + DVU2168 0.71 -1.6 2,266,306 + DVU2168 0.71 +0.2 2,266,306 + DVU2168 0.71 -0.6 2,266,314 - DVU2168 0.72 -0.5 2,266,314 - DVU2168 0.72 -0.2 2,266,332 - DVU2168 0.73 -0.2 2,266,501 + DVU2168 0.90 -0.1 2,266,509 - -0.4 2,266,693 + DVU2169 0.21 -0.0 2,266,728 + DVU2169 0.31 +0.5 2,266,736 + DVU2169 0.33 +0.1 2,266,744 - DVU2169 0.35 +1.6 2,266,855 + DVU2169 0.65 +0.4 2,266,861 + DVU2169 0.67 -0.1 2,266,863 - DVU2169 0.67 -1.7 2,266,863 - DVU2169 0.67 -0.4 2,266,906 - DVU2169 0.79 +0.2 2,266,985 + -0.1 2,266,992 - -0.0 2,267,003 + -0.2 2,267,003 + -0.1 2,267,011 - -0.9 2,267,011 - +0.4 2,267,022 + +0.4 2,267,059 - +0.4 2,267,073 - -0.9 2,267,078 + -0.1 2,267,128 - DVU2170 0.12 +0.6 2,267,128 - DVU2170 0.12 -1.0 2,267,128 - DVU2170 0.12 -1.0 2,267,135 + DVU2170 0.12 +0.9 2,267,221 - DVU2170 0.19 -0.6 2,267,221 - DVU2170 0.19 -0.4 2,267,256 + DVU2170 0.22 +1.6 2,267,380 - DVU2170 0.32 +0.2 2,267,503 - DVU2170 0.42 -0.0 2,267,528 + DVU2170 0.44 -2.0 2,267,620 - DVU2170 0.52 +0.3 2,267,674 + DVU2170 0.56 -1.3 2,267,674 + DVU2170 0.56 -0.3 2,267,682 - DVU2170 0.57 +0.5 2,267,713 - DVU2170 0.59 -0.3 2,267,719 + DVU2170 0.60 +0.1 2,267,727 - DVU2170 0.61 -0.6 2,267,727 - DVU2170 0.61 +2.1 2,267,727 - DVU2170 0.61 +0.3 2,267,793 + DVU2170 0.66 -0.1 2,267,793 + DVU2170 0.66 +1.4 2,267,879 - DVU2170 0.73 -0.4 2,267,973 + DVU2170 0.81 +0.1 2,267,976 - DVU2170 0.81 -0.7
Or see this region's nucleotide sequence