Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2020 and DVU2021 overlap by 4 nucleotides DVU2021 and DVU2022 overlap by 1 nucleotides
DVU2020: DVU2020 - conserved hypothetical protein (TIGR), at 2,098,260 to 2,100,758
DVU2020
DVU2021: DVU2021 - hypothetical protein (TIGR), at 2,100,755 to 2,101,222
DVU2021
DVU2022: DVU2022 - conserved hypothetical protein (TIGR), at 2,101,222 to 2,104,698
DVU2022
Position (kb)
2100
2101
2102 Strain fitness (log2 ratio)
-1
0
1 at 2099.758 kb on - strand, within DVU2020 at 2099.782 kb on + strand, within DVU2020 at 2099.792 kb on - strand, within DVU2020 at 2099.918 kb on + strand, within DVU2020 at 2099.931 kb on - strand, within DVU2020 at 2100.010 kb on + strand, within DVU2020 at 2100.036 kb on + strand, within DVU2020 at 2100.068 kb on - strand, within DVU2020 at 2100.115 kb on + strand, within DVU2020 at 2100.414 kb on + strand, within DVU2020 at 2100.528 kb on - strand at 2100.558 kb on - strand at 2100.899 kb on - strand, within DVU2021 at 2101.154 kb on - strand, within DVU2021 at 2101.330 kb on - strand at 2101.342 kb on - strand at 2101.419 kb on - strand at 2101.484 kb on + strand at 2101.505 kb on + strand at 2101.547 kb on + strand at 2101.547 kb on + strand at 2101.555 kb on - strand at 2101.555 kb on - strand at 2101.572 kb on + strand, within DVU2022 at 2101.639 kb on - strand, within DVU2022 at 2101.662 kb on + strand, within DVU2022 at 2101.679 kb on + strand, within DVU2022 at 2101.687 kb on - strand, within DVU2022 at 2101.687 kb on - strand, within DVU2022 at 2101.816 kb on - strand, within DVU2022 at 2101.873 kb on - strand, within DVU2022 at 2101.897 kb on - strand, within DVU2022 at 2101.936 kb on + strand, within DVU2022 at 2102.005 kb on - strand, within DVU2022 at 2102.033 kb on - strand, within DVU2022 at 2102.038 kb on + strand, within DVU2022 at 2102.038 kb on + strand, within DVU2022 at 2102.145 kb on + strand, within DVU2022 at 2102.195 kb on - strand, within DVU2022
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 2,099,758 - DVU2020 0.60 -0.2 2,099,782 + DVU2020 0.61 -0.1 2,099,792 - DVU2020 0.61 -1.2 2,099,918 + DVU2020 0.66 +0.4 2,099,931 - DVU2020 0.67 -0.5 2,100,010 + DVU2020 0.70 +0.2 2,100,036 + DVU2020 0.71 +0.3 2,100,068 - DVU2020 0.72 +1.2 2,100,115 + DVU2020 0.74 +0.3 2,100,414 + DVU2020 0.86 -0.3 2,100,528 - -0.1 2,100,558 - +0.8 2,100,899 - DVU2021 0.31 -0.1 2,101,154 - DVU2021 0.85 +0.1 2,101,330 - -0.9 2,101,342 - +0.1 2,101,419 - -0.1 2,101,484 + -0.9 2,101,505 + -0.2 2,101,547 + +0.1 2,101,547 + -0.2 2,101,555 - -0.0 2,101,555 - +0.2 2,101,572 + DVU2022 0.10 +0.1 2,101,639 - DVU2022 0.12 +0.7 2,101,662 + DVU2022 0.13 +0.0 2,101,679 + DVU2022 0.13 +0.0 2,101,687 - DVU2022 0.13 +0.3 2,101,687 - DVU2022 0.13 -0.0 2,101,816 - DVU2022 0.17 -0.3 2,101,873 - DVU2022 0.19 +0.4 2,101,897 - DVU2022 0.19 -0.7 2,101,936 + DVU2022 0.21 +1.7 2,102,005 - DVU2022 0.23 -1.3 2,102,033 - DVU2022 0.23 +0.0 2,102,038 + DVU2022 0.23 +0.2 2,102,038 + DVU2022 0.23 -0.5 2,102,145 + DVU2022 0.27 +0.8 2,102,195 - DVU2022 0.28 +0.3
Or see this region's nucleotide sequence