Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1718 and DVU1719 are separated by 4 nucleotides DVU1719 and DVU1720 overlap by 4 nucleotides DVU1720 and DVU1721 overlap by 1 nucleotides
DVU1718: DVU1718 - hypothetical protein (TIGR), at 1,792,670 to 1,793,602
DVU1718
DVU1719: DVU1719 - conserved domain protein (TIGR), at 1,793,607 to 1,794,446
DVU1719
DVU1720: DVU1720 - hypothetical protein (TIGR), at 1,794,443 to 1,794,775
DVU1720
DVU1721: DVU1721 - hypothetical protein (TIGR), at 1,794,775 to 1,796,427
DVU1721
Position (kb)
1794
1795 Strain fitness (log2 ratio)
-2
-1
0
1 at 1793.645 kb on + strand at 1793.653 kb on - strand at 1793.689 kb on - strand at 1793.713 kb on + strand, within DVU1719 at 1793.713 kb on + strand, within DVU1719 at 1793.742 kb on - strand, within DVU1719 at 1793.883 kb on + strand, within DVU1719 at 1793.908 kb on + strand, within DVU1719 at 1793.958 kb on - strand, within DVU1719 at 1794.006 kb on - strand, within DVU1719 at 1794.014 kb on - strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.024 kb on - strand, within DVU1719 at 1794.063 kb on - strand, within DVU1719 at 1794.086 kb on - strand, within DVU1719 at 1794.088 kb on + strand, within DVU1719 at 1794.129 kb on - strand, within DVU1719 at 1794.154 kb on - strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.165 kb on - strand, within DVU1719 at 1794.195 kb on - strand, within DVU1719 at 1794.290 kb on + strand, within DVU1719 at 1794.384 kb on + strand at 1794.386 kb on + strand at 1794.488 kb on + strand, within DVU1720 at 1794.672 kb on + strand, within DVU1720 at 1794.673 kb on - strand, within DVU1720 at 1794.680 kb on + strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.786 kb on - strand at 1794.815 kb on + strand at 1794.855 kb on - strand at 1794.890 kb on + strand at 1794.994 kb on + strand, within DVU1721 at 1795.111 kb on + strand, within DVU1721 at 1795.148 kb on + strand, within DVU1721 at 1795.180 kb on + strand, within DVU1721 at 1795.180 kb on + strand, within DVU1721 at 1795.188 kb on - strand, within DVU1721 at 1795.213 kb on + strand, within DVU1721 at 1795.306 kb on - strand, within DVU1721 at 1795.353 kb on - strand, within DVU1721 at 1795.359 kb on + strand, within DVU1721 at 1795.431 kb on + strand, within DVU1721 at 1795.591 kb on + strand, within DVU1721 at 1795.626 kb on + strand, within DVU1721 at 1795.697 kb on - strand, within DVU1721
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 1,793,645 + -0.1 1,793,653 - +0.1 1,793,689 - -0.2 1,793,713 + DVU1719 0.13 -0.2 1,793,713 + DVU1719 0.13 -0.1 1,793,742 - DVU1719 0.16 -0.2 1,793,883 + DVU1719 0.33 +1.1 1,793,908 + DVU1719 0.36 +0.1 1,793,958 - DVU1719 0.42 +0.2 1,794,006 - DVU1719 0.47 -0.1 1,794,014 - DVU1719 0.48 +0.1 1,794,016 + DVU1719 0.49 -0.5 1,794,016 + DVU1719 0.49 -0.5 1,794,018 + DVU1719 0.49 +1.0 1,794,018 + DVU1719 0.49 +0.4 1,794,024 - DVU1719 0.50 +1.4 1,794,063 - DVU1719 0.54 -1.7 1,794,086 - DVU1719 0.57 -1.5 1,794,088 + DVU1719 0.57 -2.5 1,794,129 - DVU1719 0.62 +0.6 1,794,154 - DVU1719 0.65 -1.7 1,794,157 + DVU1719 0.65 -0.1 1,794,157 + DVU1719 0.65 -0.3 1,794,165 - DVU1719 0.66 +0.4 1,794,195 - DVU1719 0.70 +0.2 1,794,290 + DVU1719 0.81 +0.4 1,794,384 + +0.0 1,794,386 + +0.9 1,794,488 + DVU1720 0.14 +0.4 1,794,672 + DVU1720 0.69 +0.3 1,794,673 - DVU1720 0.69 +0.7 1,794,680 + DVU1720 0.71 +0.1 1,794,710 - DVU1720 0.80 -0.2 1,794,710 - DVU1720 0.80 -0.4 1,794,710 - DVU1720 0.80 +0.5 1,794,786 - +1.5 1,794,815 + +0.1 1,794,855 - -1.1 1,794,890 + +0.2 1,794,994 + DVU1721 0.13 +0.8 1,795,111 + DVU1721 0.20 -0.4 1,795,148 + DVU1721 0.23 +0.1 1,795,180 + DVU1721 0.25 +0.4 1,795,180 + DVU1721 0.25 -0.1 1,795,188 - DVU1721 0.25 -1.1 1,795,213 + DVU1721 0.26 -0.7 1,795,306 - DVU1721 0.32 -0.4 1,795,353 - DVU1721 0.35 +1.7 1,795,359 + DVU1721 0.35 -0.6 1,795,431 + DVU1721 0.40 +0.2 1,795,591 + DVU1721 0.49 -0.1 1,795,626 + DVU1721 0.51 -0.2 1,795,697 - DVU1721 0.56 +0.2
Or see this region's nucleotide sequence