Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mviN-1 and DVU1174 are separated by 334 nucleotides DVU1174 and DVU1175 are separated by 36 nucleotides DVU1175 and DVU1176 are separated by 325 nucleotides
DVU1173: mviN-1 - integral membrane protein MviN (TIGR), at 1,264,555 to 1,266,111
mviN-1
DVU1174: DVU1174 - hypothetical protein (TIGR), at 1,266,446 to 1,266,823
DVU1174
DVU1175: DVU1175 - hypothetical protein (TIGR), at 1,266,860 to 1,267,153
DVU1175
DVU1176: DVU1176 - hypothetical protein (TIGR), at 1,267,479 to 1,268,036
DVU1176
Position (kb)
1266
1267
1268 Strain fitness (log2 ratio)
-2
-1
0
1 at 1266.107 kb on + strand at 1266.108 kb on - strand at 1266.120 kb on + strand at 1266.138 kb on + strand at 1266.146 kb on - strand at 1266.229 kb on + strand at 1266.258 kb on - strand at 1266.430 kb on - strand at 1266.430 kb on - strand at 1266.451 kb on + strand at 1266.476 kb on + strand at 1266.531 kb on - strand, within DVU1174 at 1266.719 kb on - strand, within DVU1174 at 1266.744 kb on - strand, within DVU1174 at 1266.755 kb on + strand, within DVU1174 at 1266.882 kb on - strand at 1266.976 kb on - strand, within DVU1175 at 1267.029 kb on + strand, within DVU1175 at 1267.340 kb on + strand at 1267.483 kb on - strand at 1267.541 kb on - strand, within DVU1176 at 1267.546 kb on + strand, within DVU1176 at 1267.590 kb on + strand, within DVU1176 at 1267.590 kb on + strand, within DVU1176 at 1267.619 kb on + strand, within DVU1176 at 1267.671 kb on - strand, within DVU1176 at 1267.728 kb on + strand, within DVU1176 at 1267.752 kb on - strand, within DVU1176 at 1267.754 kb on + strand, within DVU1176 at 1267.754 kb on + strand, within DVU1176 at 1267.757 kb on - strand, within DVU1176 at 1267.762 kb on - strand, within DVU1176 at 1267.856 kb on - strand, within DVU1176 at 1267.866 kb on - strand, within DVU1176 at 1267.881 kb on - strand, within DVU1176 at 1267.919 kb on + strand, within DVU1176 at 1267.927 kb on - strand, within DVU1176 at 1267.960 kb on - strand, within DVU1176 at 1267.982 kb on - strand at 1267.993 kb on - strand at 1267.993 kb on - strand at 1268.030 kb on + strand at 1268.030 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 1,266,107 + +1.7 1,266,108 - -2.2 1,266,120 + -0.4 1,266,138 + -0.0 1,266,146 - -0.7 1,266,229 + -0.0 1,266,258 - +0.3 1,266,430 - -0.7 1,266,430 - -0.7 1,266,451 + -0.4 1,266,476 + +0.8 1,266,531 - DVU1174 0.22 -1.2 1,266,719 - DVU1174 0.72 +0.3 1,266,744 - DVU1174 0.79 +0.5 1,266,755 + DVU1174 0.82 +0.3 1,266,882 - +0.2 1,266,976 - DVU1175 0.39 +0.1 1,267,029 + DVU1175 0.57 +0.1 1,267,340 + -0.2 1,267,483 - +1.0 1,267,541 - DVU1176 0.11 -1.0 1,267,546 + DVU1176 0.12 +0.1 1,267,590 + DVU1176 0.20 +0.6 1,267,590 + DVU1176 0.20 -0.0 1,267,619 + DVU1176 0.25 -0.4 1,267,671 - DVU1176 0.34 -0.1 1,267,728 + DVU1176 0.45 +0.6 1,267,752 - DVU1176 0.49 -0.3 1,267,754 + DVU1176 0.49 +0.0 1,267,754 + DVU1176 0.49 +0.1 1,267,757 - DVU1176 0.50 +1.4 1,267,762 - DVU1176 0.51 +0.4 1,267,856 - DVU1176 0.68 -0.4 1,267,866 - DVU1176 0.69 -0.3 1,267,881 - DVU1176 0.72 -0.2 1,267,919 + DVU1176 0.79 -2.0 1,267,927 - DVU1176 0.80 +0.1 1,267,960 - DVU1176 0.86 +0.1 1,267,982 - +1.3 1,267,993 - -0.4 1,267,993 - -0.3 1,268,030 + -0.1 1,268,030 + -1.8
Or see this region's nucleotide sequence