Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ptsI and DVU0982 are separated by 37 nucleotides DVU0982 and DVU0983 are separated by 1 nucleotides DVU0983 and miaB overlap by 7 nucleotides
DVU0981: ptsI - multiphosphoryl transfer protein, putative (TIGR), at 1,076,460 to 1,079,024
ptsI
DVU0982: DVU0982 - PHP domain protein (TIGR), at 1,079,062 to 1,079,721
DVU0982
DVU0983: DVU0983 - conserved hypothetical protein (TIGR), at 1,079,723 to 1,080,268
DVU0983
DVU0984: miaB - tRNA-i(6)A37 modification enzyme MiaB (TIGR), at 1,080,262 to 1,081,611
miaB
Position (kb) 1079
1080
1081 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1078.834 kb on - strand at 1078.840 kb on - strand at 1078.974 kb on + strand at 1079.042 kb on - strand at 1079.102 kb on - strand at 1079.124 kb on + strand at 1079.134 kb on + strand, within DVU0982 at 1079.282 kb on - strand, within DVU0982 at 1079.339 kb on - strand, within DVU0982 at 1079.374 kb on + strand, within DVU0982 at 1079.422 kb on + strand, within DVU0982 at 1079.431 kb on - strand, within DVU0982 at 1079.555 kb on - strand, within DVU0982 at 1079.656 kb on + strand at 1079.808 kb on + strand, within DVU0983 at 1079.813 kb on + strand, within DVU0983 at 1079.821 kb on - strand, within DVU0983 at 1079.935 kb on + strand, within DVU0983 at 1080.086 kb on - strand, within DVU0983 at 1080.272 kb on + strand at 1080.285 kb on - strand at 1080.310 kb on - strand at 1080.334 kb on - strand at 1080.345 kb on + strand at 1080.345 kb on + strand at 1080.353 kb on - strand at 1080.381 kb on - strand at 1080.502 kb on + strand, within miaB at 1080.512 kb on + strand, within miaB at 1080.512 kb on + strand, within miaB at 1080.521 kb on + strand, within miaB at 1080.536 kb on + strand, within miaB at 1080.582 kb on + strand, within miaB at 1080.590 kb on - strand, within miaB at 1080.673 kb on - strand, within miaB at 1080.721 kb on - strand, within miaB at 1080.799 kb on + strand, within miaB at 1080.868 kb on - strand, within miaB at 1080.892 kb on - strand, within miaB at 1080.924 kb on - strand, within miaB at 1081.012 kb on + strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.086 kb on + strand, within miaB at 1081.094 kb on - strand, within miaB at 1081.124 kb on + strand, within miaB at 1081.151 kb on + strand, within miaB at 1081.194 kb on - strand, within miaB
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 1,078,834 - -0.5 1,078,840 - -1.0 1,078,974 + +0.1 1,079,042 - +0.1 1,079,102 - -0.2 1,079,124 + -1.1 1,079,134 + DVU0982 0.11 -0.3 1,079,282 - DVU0982 0.33 +0.1 1,079,339 - DVU0982 0.42 -0.2 1,079,374 + DVU0982 0.47 +0.6 1,079,422 + DVU0982 0.55 -0.5 1,079,431 - DVU0982 0.56 -0.0 1,079,555 - DVU0982 0.75 +0.2 1,079,656 + -0.7 1,079,808 + DVU0983 0.16 -0.2 1,079,813 + DVU0983 0.16 -2.8 1,079,821 - DVU0983 0.18 -1.4 1,079,935 + DVU0983 0.39 -1.8 1,080,086 - DVU0983 0.66 -0.4 1,080,272 + +0.3 1,080,285 - -0.3 1,080,310 - -0.3 1,080,334 - -0.1 1,080,345 + -1.0 1,080,345 + +0.2 1,080,353 - -0.1 1,080,381 - -0.4 1,080,502 + miaB DVU0984 0.18 -0.1 1,080,512 + miaB DVU0984 0.19 -0.1 1,080,512 + miaB DVU0984 0.19 -0.9 1,080,521 + miaB DVU0984 0.19 -0.4 1,080,536 + miaB DVU0984 0.20 -0.4 1,080,582 + miaB DVU0984 0.24 +1.0 1,080,590 - miaB DVU0984 0.24 +0.0 1,080,673 - miaB DVU0984 0.30 +0.5 1,080,721 - miaB DVU0984 0.34 -0.8 1,080,799 + miaB DVU0984 0.40 -0.4 1,080,868 - miaB DVU0984 0.45 -0.4 1,080,892 - miaB DVU0984 0.47 -0.8 1,080,924 - miaB DVU0984 0.49 -0.1 1,081,012 + miaB DVU0984 0.56 -0.0 1,081,047 - miaB DVU0984 0.58 -1.5 1,081,047 - miaB DVU0984 0.58 +0.1 1,081,047 - miaB DVU0984 0.58 -0.3 1,081,086 + miaB DVU0984 0.61 -0.3 1,081,094 - miaB DVU0984 0.62 +0.0 1,081,124 + miaB DVU0984 0.64 -0.2 1,081,151 + miaB DVU0984 0.66 -0.8 1,081,194 - miaB DVU0984 0.69 -0.3
Or see this region's nucleotide sequence