Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rfbA and DVU0926 are separated by 269 nucleotides DVU0926 and rplU are separated by 116 nucleotides rplU and rpmA are separated by 20 nucleotides rpmA and obg are separated by 148 nucleotides
DVU0925: rfbA - glucose-1-phosphate thymidylyltransferase (TIGR), at 1,016,369 to 1,017,277
rfbA
DVU0926: DVU0926 - hypothetical protein (TIGR), at 1,017,547 to 1,017,738
DVU0926
DVU0927: rplU - ribosomal protein L21 (TIGR), at 1,017,855 to 1,018,163
rplU
DVU0928: rpmA - ribosomal protein L27 (TIGR), at 1,018,184 to 1,018,447
rpmA
DVU0929: obg - GTP-binding protein, GTP1/OBG family (TIGR), at 1,018,596 to 1,019,696
obg
Position (kb)
1017
1018 Strain fitness (log2 ratio)
-2
-1
0
1 at 1017.357 kb on + strand at 1017.375 kb on - strand at 1017.399 kb on + strand at 1017.407 kb on - strand at 1017.432 kb on + strand at 1017.439 kb on - strand at 1017.570 kb on + strand, within DVU0926 at 1017.588 kb on - strand, within DVU0926 at 1017.658 kb on - strand, within DVU0926 at 1017.688 kb on + strand, within DVU0926 at 1017.704 kb on + strand, within DVU0926 at 1017.752 kb on - strand at 1017.752 kb on - strand at 1017.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 1,017,357 + -0.3 1,017,375 - +0.1 1,017,399 + -1.2 1,017,407 - +0.2 1,017,432 + -1.1 1,017,439 - +0.2 1,017,570 + DVU0926 0.12 -2.3 1,017,588 - DVU0926 0.21 -2.0 1,017,658 - DVU0926 0.58 -1.1 1,017,688 + DVU0926 0.73 -0.2 1,017,704 + DVU0926 0.82 -0.6 1,017,752 - -0.6 1,017,752 - -1.5 1,017,752 - +0.4
Or see this region's nucleotide sequence