Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0821 and DVU0822 are separated by 11 nucleotides DVU0822 and tRNA-Ser are separated by 155 nucleotides tRNA-Ser and argJ are separated by 156 nucleotides
DVU0821: DVU0821 - conserved hypothetical protein (TIGR), at 909,911 to 910,510
DVU0821
DVU0822: DVU0822 - hypothetical protein (TIGR), at 910,522 to 911,178
DVU0822
DVU_tRNA-Ser-3: tRNA-Ser - tRNA with anticodon GCT for Ser (VIMSS-AUTO), at 911,334 to 911,428
tRNA-Ser
DVU0823: argJ - Glutamate N-acetyltransferase (EC 2.3.1.35) <small>(from data)</small>, at 911,585 to 912,766
argJ
Position (kb) 910
911
912 Strain fitness (log2 ratio) -2
-1
0
1
2 at 909.530 kb on - strand at 909.569 kb on + strand at 909.623 kb on - strand at 909.701 kb on + strand at 909.723 kb on + strand at 909.731 kb on - strand at 909.731 kb on - strand at 909.800 kb on - strand at 909.859 kb on - strand at 909.939 kb on + strand at 909.942 kb on - strand at 909.947 kb on - strand at 910.143 kb on + strand, within DVU0821 at 910.151 kb on - strand, within DVU0821 at 910.187 kb on - strand, within DVU0821 at 910.619 kb on + strand, within DVU0822 at 910.878 kb on + strand, within DVU0822 at 910.971 kb on - strand, within DVU0822 at 911.587 kb on - strand at 911.661 kb on - strand at 911.719 kb on - strand, within argJ at 911.729 kb on + strand, within argJ at 911.749 kb on - strand, within argJ at 911.761 kb on + strand, within argJ at 911.761 kb on + strand, within argJ at 911.761 kb on + strand, within argJ at 911.960 kb on - strand, within argJ at 912.086 kb on + strand, within argJ at 912.094 kb on - strand, within argJ
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 909,530 - -0.1 909,569 + -0.3 909,623 - +0.8 909,701 + -0.3 909,723 + -1.3 909,731 - +0.1 909,731 - +0.0 909,800 - -0.4 909,859 - -0.2 909,939 + +0.3 909,942 - -0.3 909,947 - -0.8 910,143 + DVU0821 0.39 -2.0 910,151 - DVU0821 0.40 +0.6 910,187 - DVU0821 0.46 -0.4 910,619 + DVU0822 0.15 -1.4 910,878 + DVU0822 0.54 -0.3 910,971 - DVU0822 0.68 -1.1 911,587 - +1.4 911,661 - +0.5 911,719 - argJ DVU0823 0.11 +1.8 911,729 + argJ DVU0823 0.12 -0.0 911,749 - argJ DVU0823 0.14 +1.7 911,761 + argJ DVU0823 0.15 -0.4 911,761 + argJ DVU0823 0.15 -0.6 911,761 + argJ DVU0823 0.15 -0.6 911,960 - argJ DVU0823 0.32 -0.2 912,086 + argJ DVU0823 0.42 -0.1 912,094 - argJ DVU0823 0.43 -0.3
Or see this region's nucleotide sequence