Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.5018.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
4,754,556	-		Xcc-8004.5017.1	0.69	+1.4
4,754,556	-		Xcc-8004.5017.1	0.69	-1.3
4,754,556	-		Xcc-8004.5017.1	0.69	+0.4
4,754,669	+		Xcc-8004.5017.1	0.75	-0.9
4,754,726	+		Xcc-8004.5017.1	0.77	+0.1
4,754,726	+		Xcc-8004.5017.1	0.77	-0.6
4,754,726	+		Xcc-8004.5017.1	0.77	+0.1
4,754,727	-		Xcc-8004.5017.1	0.77	+1.3
4,754,727	-		Xcc-8004.5017.1	0.77	+1.2
4,754,969	+		Xcc-8004.5017.1	0.89	+0.9
4,754,970	-		Xcc-8004.5017.1	0.89	+1.1
4,754,970	-		Xcc-8004.5017.1	0.89	+1.3
4,755,093	+				-0.4
4,755,093	+				-1.1
4,755,093	+				-0.4
4,755,093	+				-0.9
4,755,093	+				-0.4
4,755,093	+				-1.1
4,755,093	+				+0.5
4,755,093	+				+0.9
4,755,094	-				+0.4
4,755,094	-				+1.5
4,755,094	-				-1.1
4,755,094	-				+2.7
4,755,094	-				-2.0
4,755,094	-				+0.1
4,755,113	+				+0.4
4,755,113	+				-1.2
4,755,163	-				-1.1
4,755,163	-				-1.3
4,755,163	-				+1.1
4,755,163	-				-1.8
4,755,213	+				-0.3
4,755,214	-				-0.3
4,755,518	+		Xcc-8004.5018.1	0.48	+0.9
4,755,518	+		Xcc-8004.5018.1	0.48	-1.3
4,755,518	+		Xcc-8004.5018.1	0.48	+1.5
4,755,518	+		Xcc-8004.5018.1	0.48	+0.2
4,755,518	+		Xcc-8004.5018.1	0.48	+0.5
4,755,518	+		Xcc-8004.5018.1	0.48	+1.6
4,755,518	+		Xcc-8004.5018.1	0.48	+0.3
4,755,519	-		Xcc-8004.5018.1	0.48	+2.0
4,755,654	-				-1.5
4,755,674	+		Xcc-8004.5019.1	0.12	+1.1
4,755,675	-		Xcc-8004.5019.1	0.12	-1.1
4,755,675	-		Xcc-8004.5019.1	0.12	+0.9
4,756,043	+				-1.0
4,756,187	+		Xcc-8004.5020.1	0.22	-1.1
4,756,187	+		Xcc-8004.5020.1	0.22	+0.8
4,756,188	-		Xcc-8004.5020.1	0.22	-0.3
4,756,325	+		Xcc-8004.5020.1	0.38	+1.1
4,756,498	+		Xcc-8004.5020.1	0.59	-1.4
4,756,498	+		Xcc-8004.5020.1	0.59	-0.5
4,756,499	-		Xcc-8004.5020.1	0.59	-1.0