Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.4766.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
4,535,758	+		Xcc-8004.4764.1	0.22	+1.6
4,535,759	-		Xcc-8004.4764.1	0.22	+1.4
4,535,862	+		Xcc-8004.4764.1	0.44	+0.8
4,535,962	+		Xcc-8004.4764.1	0.64	+0.9
4,535,962	+		Xcc-8004.4764.1	0.64	-0.6
4,535,963	-		Xcc-8004.4764.1	0.65	-1.0
4,535,963	-		Xcc-8004.4764.1	0.65	+1.0
4,535,963	-		Xcc-8004.4764.1	0.65	+0.8
4,535,963	-		Xcc-8004.4764.1	0.65	+0.1
4,535,963	-		Xcc-8004.4764.1	0.65	+0.8
4,535,963	-		Xcc-8004.4764.1	0.65	-0.6
4,536,012	+		Xcc-8004.4764.1	0.75	+1.1
4,536,013	-		Xcc-8004.4764.1	0.75	+0.2
4,536,013	-		Xcc-8004.4764.1	0.75	-0.4
4,536,013	-		Xcc-8004.4764.1	0.75	+0.8
4,536,016	+		Xcc-8004.4764.1	0.76	+1.1
4,536,016	+		Xcc-8004.4764.1	0.76	+0.8
4,536,017	-		Xcc-8004.4764.1	0.76	+0.3
4,536,017	-		Xcc-8004.4764.1	0.76	+0.6
4,536,073	+		Xcc-8004.4764.1	0.88	+0.9
4,536,100	+				+0.0
4,536,100	+				-0.0
4,536,101	-				-0.0
4,536,137	+				-0.6
4,536,137	+				+1.1
4,536,137	+				-0.3
4,536,137	+				-0.8
4,536,138	-				+0.1
4,536,138	-				-1.0
4,536,138	-				+1.0
4,536,188	+				-1.5
4,536,188	+				+0.2
4,536,188	+				-0.5
4,536,188	+				+0.2
4,536,188	+				-0.6
4,536,188	+				+0.6
4,536,189	-				-0.7
4,536,189	-				-0.4
4,536,189	-				-0.0
4,536,201	-				+0.2
4,536,229	+				+0.8
4,536,230	-				+0.9
4,536,230	-				-0.3
4,536,230	-				+1.1
4,536,235	+				-0.3
4,536,250	+				-0.8
4,536,251	-				-0.7
4,536,251	-				-0.8
4,536,313	+				-0.7
4,536,363	-				-1.4
4,536,404	-				-0.9
4,536,453	+				-0.6
4,536,518	-				+0.1
4,536,563	+				-2.2
4,536,564	-				-1.2
4,536,564	-				-0.1
4,536,564	-				+0.4
4,536,566	+				-0.5
4,536,566	+				-1.3
4,536,567	-				-0.2
4,536,567	-				+0.9
4,536,614	+				+0.7
4,536,614	+				-1.2
4,536,615	-				-0.1
4,536,623	+				+0.8
4,536,624	-				+1.7
4,536,624	-				+0.7
4,536,639	-				-1.0
4,536,667	+				+1.1
4,536,667	+				+1.2
4,536,668	-				-2.1
4,536,668	-				-0.8
4,536,670	+				+1.2
4,536,670	+				+0.6
4,536,670	+				+0.1
4,536,671	-				+0.6
4,536,671	-				-0.2
4,536,671	-				-0.6
4,536,702	+				+0.5
4,536,703	-				-0.0
4,536,751	+				-0.2
4,536,752	-				+2.7
4,537,252	+		Xcc-8004.4767.1	0.25	-0.8
4,537,252	+		Xcc-8004.4767.1	0.25	+0.0
4,537,252	+		Xcc-8004.4767.1	0.25	-0.6
4,537,253	-		Xcc-8004.4767.1	0.25	+1.0
4,537,253	-		Xcc-8004.4767.1	0.25	+0.4
4,537,253	-		Xcc-8004.4767.1	0.25	-0.2
4,537,456	+		Xcc-8004.4767.1	0.49	+2.0
4,537,456	+		Xcc-8004.4767.1	0.49	-0.6
4,537,456	+		Xcc-8004.4767.1	0.49	-1.4
4,537,456	+		Xcc-8004.4767.1	0.49	+1.5
4,537,456	+		Xcc-8004.4767.1	0.49	+1.3
4,537,456	+		Xcc-8004.4767.1	0.49	-0.2
4,537,457	-		Xcc-8004.4767.1	0.50	-3.1
4,537,457	-		Xcc-8004.4767.1	0.50	-2.4
4,537,457	-		Xcc-8004.4767.1	0.50	-0.7
4,537,516	+		Xcc-8004.4767.1	0.57	+0.6
4,537,610	-		Xcc-8004.4767.1	0.68	-0.1
4,537,670	-		Xcc-8004.4767.1	0.75	-0.2
4,537,753	+		Xcc-8004.4767.1	0.85	-0.6
4,537,753	+		Xcc-8004.4767.1	0.85	-0.4