Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3968.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
3,843,481	-				-0.9
3,843,481	-				+0.5
3,843,487	-				+1.5
3,843,487	-				-0.9
3,843,825	+				-1.2
3,843,860	+				+0.1
3,843,860	+				+0.3
3,843,860	+				+1.1
3,843,861	-				-2.5
3,843,982	+				-3.0
3,844,002	+				-0.8
3,844,165	+				-1.1
3,844,196	+				-1.5
3,844,197	-				+1.4
3,844,393	+				+0.7
3,844,599	+		Xcc-8004.3968.1	0.38	-0.6
3,844,680	-		Xcc-8004.3968.1	0.50	-2.1
3,844,863	+		Xcc-8004.3968.1	0.79	-1.0
3,844,863	+		Xcc-8004.3968.1	0.79	-1.2
3,844,864	-		Xcc-8004.3968.1	0.79	-0.5
3,844,914	+		Xcc-8004.3968.1	0.87	-0.2
3,844,914	+		Xcc-8004.3968.1	0.87	+1.3
3,844,915	-		Xcc-8004.3968.1	0.87	+0.0
3,844,995	+				-0.1
3,845,128	+				+0.6
3,845,129	-				-0.4
3,845,129	-				+1.2
3,845,248	+				+0.1
3,845,249	-				+0.6
3,845,416	+				+1.1
3,845,417	-				+0.4
3,845,449	+				-0.5
3,845,449	+				-0.2
3,845,449	+				+1.1
3,845,449	+				-0.0
3,845,450	-				-0.6
3,845,450	-				-0.9
3,845,479	+				+1.4
3,845,479	+				-2.0
3,845,480	-				-0.5
3,845,783	-				-0.2
3,845,783	-				-0.4
3,845,864	-		Xcc-8004.3970.1	0.10	+1.2
3,845,927	+		Xcc-8004.3970.1	0.12	-0.6