Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.2783.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
2,695,939	+		Xcc-8004.2782.1	0.39	-1.8
2,695,939	+		Xcc-8004.2782.1	0.39	-1.1
2,695,939	+		Xcc-8004.2782.1	0.39	-1.0
2,695,939	+		Xcc-8004.2782.1	0.39	-0.4
2,695,939	+		Xcc-8004.2782.1	0.39	-0.1
2,695,939	+		Xcc-8004.2782.1	0.39	+0.4
2,695,948	-		Xcc-8004.2782.1	0.40	-2.3
2,696,193	+		Xcc-8004.2782.1	0.72	+0.7
2,696,193	+		Xcc-8004.2782.1	0.72	-1.4
2,696,193	+		Xcc-8004.2782.1	0.72	-0.9
2,696,193	+		Xcc-8004.2782.1	0.72	+0.4
2,696,194	-		Xcc-8004.2782.1	0.73	-1.8
2,696,194	-		Xcc-8004.2782.1	0.73	-1.0
2,696,194	-		Xcc-8004.2782.1	0.73	+1.0
2,696,544	+				-0.7
2,696,544	+				-2.1
2,696,544	+				-0.4
2,696,544	+				-0.4
2,696,545	-				-1.5
2,696,663	+				+1.2
2,696,663	+				-0.9
2,696,663	+				+2.4
2,696,664	-				+0.7
2,696,732	-				-0.8
2,696,732	-				-1.3
2,696,732	-				+0.6
2,696,732	-				-0.5
2,696,732	-				-1.1
2,696,732	-				-0.8
2,696,732	-				-0.9
2,696,732	-				-0.7
2,696,826	+		Xcc-8004.2783.1	0.49	+0.7
2,696,827	-		Xcc-8004.2783.1	0.50	-1.0
2,696,827	-		Xcc-8004.2783.1	0.50	-0.4
2,696,844	+		Xcc-8004.2783.1	0.60	+1.4
2,696,845	-		Xcc-8004.2783.1	0.61	+0.4
2,697,003	+				-2.0
2,697,004	-				+0.3
2,697,004	-				-0.1
2,697,004	-				-1.0
2,697,148	+				+0.6
2,697,148	+				-3.1
2,697,303	+				-1.9
2,697,303	+				-0.5
2,697,303	+				-0.1
2,697,303	+				-1.0
2,697,303	+				-0.4
2,697,303	+				+1.2
2,697,303	+				-0.9
2,697,303	+				-1.9
2,697,303	+				-0.8
2,697,303	+				-0.7
2,697,303	+				+0.4
2,697,303	+				+0.4
2,697,303	+				-0.3
2,697,303	+				+2.2
2,697,303	+				+1.4
2,697,303	+				-1.4
2,697,303	+				+1.4
2,697,303	+				-0.2
2,697,304	-				+1.4
2,697,304	-				-0.4
2,697,304	-				+0.6
2,697,304	-				+0.2
2,697,304	-				+0.1
2,697,304	-				-1.8
2,697,304	-				+0.8
2,697,304	-				+0.5
2,697,304	-				-1.3
2,697,304	-				+0.9
2,697,304	-				+0.1
2,697,304	-				+0.6
2,697,304	-				+0.5
2,697,304	-				-0.6
2,697,304	-				+0.3
2,697,304	-				-0.7
2,697,305	+				-0.2
2,697,305	+				+2.1
2,697,305	+				-0.1
2,697,305	+				-1.3
2,697,306	-				-1.4
2,697,306	-				-0.0
2,697,306	-				-0.6
2,697,306	-				-0.9
2,697,306	-				+1.1
2,697,438	+		Xcc-8004.2784.1	0.11	+1.5
2,697,438	+		Xcc-8004.2784.1	0.11	+0.4
2,697,438	+		Xcc-8004.2784.1	0.11	-0.4
2,697,439	-		Xcc-8004.2784.1	0.11	+0.2
2,697,444	+		Xcc-8004.2784.1	0.11	+1.1
2,697,444	+		Xcc-8004.2784.1	0.11	+1.1
2,697,445	-		Xcc-8004.2784.1	0.11	-1.1
2,697,445	-		Xcc-8004.2784.1	0.11	+1.0
2,697,490	+		Xcc-8004.2784.1	0.17	-2.4
2,697,490	+		Xcc-8004.2784.1	0.17	-0.2
2,697,491	-		Xcc-8004.2784.1	0.17	-0.3
2,697,491	-		Xcc-8004.2784.1	0.17	-0.2
2,697,491	-		Xcc-8004.2784.1	0.17	+0.4
2,697,491	-		Xcc-8004.2784.1	0.17	+1.3
2,697,491	-		Xcc-8004.2784.1	0.17	+0.8
2,697,491	-		Xcc-8004.2784.1	0.17	+0.4
2,697,491	-		Xcc-8004.2784.1	0.17	+0.2
2,697,491	-		Xcc-8004.2784.1	0.17	-2.6
2,697,491	-		Xcc-8004.2784.1	0.17	+0.2
2,697,685	-		Xcc-8004.2784.1	0.42	-1.9
2,697,685	-		Xcc-8004.2784.1	0.42	-0.7
2,697,694	+		Xcc-8004.2784.1	0.43	-0.3
2,697,694	+		Xcc-8004.2784.1	0.43	+1.2
2,697,694	+		Xcc-8004.2784.1	0.43	-1.5
2,697,694	+		Xcc-8004.2784.1	0.43	+0.7
2,697,695	-		Xcc-8004.2784.1	0.43	-0.1