Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.2140.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
2,055,241	+		Xcc-8004.2139.1	0.17	+0.7
2,055,328	+		Xcc-8004.2139.1	0.24	+2.7
2,055,330	+		Xcc-8004.2139.1	0.24	-0.0
2,055,330	+		Xcc-8004.2139.1	0.24	-0.8
2,055,330	+		Xcc-8004.2139.1	0.24	-2.0
2,055,331	-		Xcc-8004.2139.1	0.24	-0.3
2,055,331	-		Xcc-8004.2139.1	0.24	-0.4
2,055,331	-		Xcc-8004.2139.1	0.24	+0.0
2,055,331	-		Xcc-8004.2139.1	0.24	-0.8
2,055,560	-		Xcc-8004.2139.1	0.43	+0.2
2,055,832	+		Xcc-8004.2139.1	0.65	-0.7
2,055,832	+		Xcc-8004.2139.1	0.65	+1.1
2,055,833	-		Xcc-8004.2139.1	0.65	+0.9
2,056,112	+		Xcc-8004.2139.1	0.88	-1.1
2,056,112	+		Xcc-8004.2139.1	0.88	+0.4
2,056,647	+				-0.7
2,056,647	+				+0.6
2,056,648	-				-0.1
2,056,648	-				+0.8
2,056,648	-				-0.3
2,056,728	+				+0.4
2,057,134	-		Xcc-8004.2142.1	0.13	-0.0
2,057,134	-		Xcc-8004.2142.1	0.13	+1.4
2,057,490	-		Xcc-8004.2142.1	0.28	+0.8
2,057,490	-		Xcc-8004.2142.1	0.28	+0.7
2,057,496	+		Xcc-8004.2142.1	0.29	-1.7
2,057,496	+		Xcc-8004.2142.1	0.29	-0.7
2,057,496	+		Xcc-8004.2142.1	0.29	+1.2
2,057,503	+		Xcc-8004.2142.1	0.29	-0.0
2,057,504	-		Xcc-8004.2142.1	0.29	+0.9
2,057,504	-		Xcc-8004.2142.1	0.29	-0.5
2,057,504	-		Xcc-8004.2142.1	0.29	+0.6
2,057,556	+		Xcc-8004.2142.1	0.31	+0.8