Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04778 and H281DRAFT_04779 are separated by 63 nucleotides H281DRAFT_04779 and H281DRAFT_04780 are separated by 31 nucleotides H281DRAFT_04780 and H281DRAFT_04781 are separated by 183 nucleotides
H281DRAFT_04778: H281DRAFT_04778 - Glycosyltransferase involved in cell wall bisynthesis, at 199,632 to 200,774
_04778
H281DRAFT_04779: H281DRAFT_04779 - colanic acid biosynthesis glycosyl transferase WcaI, at 200,838 to 202,169
_04779
H281DRAFT_04780: H281DRAFT_04780 - hypothetical protein, at 202,201 to 202,695
_04780
H281DRAFT_04781: H281DRAFT_04781 - putative colanic acid biosynthesis acetyltransferase WcaF, at 202,879 to 203,493
_04781
Position (kb) 200
201
202
203 Strain fitness (log2 ratio) -2
-1
0
1
2 at 199.942 kb on - strand, within H281DRAFT_04778 at 200.455 kb on - strand, within H281DRAFT_04778 at 200.701 kb on + strand at 200.701 kb on + strand at 200.702 kb on - strand at 200.816 kb on + strand at 200.817 kb on - strand at 201.166 kb on + strand, within H281DRAFT_04779 at 201.258 kb on + strand, within H281DRAFT_04779 at 201.259 kb on - strand, within H281DRAFT_04779 at 202.022 kb on + strand, within H281DRAFT_04779 at 202.023 kb on - strand, within H281DRAFT_04779 at 202.142 kb on + strand at 202.253 kb on + strand, within H281DRAFT_04780 at 202.254 kb on - strand, within H281DRAFT_04780 at 202.675 kb on - strand at 202.710 kb on + strand at 202.711 kb on - strand at 202.845 kb on - strand at 203.010 kb on - strand, within H281DRAFT_04781
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 199,942 - H281DRAFT_04778 0.27 +0.9 200,455 - H281DRAFT_04778 0.72 +0.3 200,701 + -0.4 200,701 + -0.6 200,702 - -1.9 200,816 + -1.2 200,817 - -0.6 201,166 + H281DRAFT_04779 0.25 -1.7 201,258 + H281DRAFT_04779 0.32 -2.2 201,259 - H281DRAFT_04779 0.32 -0.0 202,022 + H281DRAFT_04779 0.89 +0.6 202,023 - H281DRAFT_04779 0.89 +2.3 202,142 + +1.0 202,253 + H281DRAFT_04780 0.11 +0.2 202,254 - H281DRAFT_04780 0.11 +1.5 202,675 - +0.2 202,710 + -1.1 202,711 - -0.1 202,845 - +0.1 203,010 - H281DRAFT_04781 0.21 -1.5
Or see this region's nucleotide sequence