Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04336 and H281DRAFT_04337 are separated by 59 nucleotides H281DRAFT_04337 and H281DRAFT_04338 are separated by 8 nucleotides H281DRAFT_04338 and H281DRAFT_04339 are separated by 193 nucleotides
H281DRAFT_04336: H281DRAFT_04336 - molybdopterin molybdochelatase (EC 2.10.1.1), at 52,190 to 53,491
_04336
H281DRAFT_04337: H281DRAFT_04337 - molybdenum cofactor guanylyltransferase (EC 2.7.7.77), at 53,551 to 54,189
_04337
H281DRAFT_04338: H281DRAFT_04338 - cyclic pyranopterin monophosphate synthase subunit MoaA, at 54,198 to 55,307
_04338
H281DRAFT_04339: H281DRAFT_04339 - RNAse E (EC 3.1.26.12), at 55,501 to 58,824
_04339
Position (kb) 54
55
56 Strain fitness (log2 ratio) -2
-1
0
1
2 at 53.435 kb on + strand at 53.436 kb on - strand at 53.451 kb on + strand at 53.452 kb on - strand at 53.520 kb on - strand at 53.609 kb on + strand at 53.696 kb on + strand, within H281DRAFT_04337 at 53.697 kb on - strand, within H281DRAFT_04337 at 53.697 kb on - strand, within H281DRAFT_04337 at 53.993 kb on + strand, within H281DRAFT_04337 at 54.211 kb on + strand at 54.211 kb on + strand at 54.397 kb on + strand, within H281DRAFT_04338 at 54.398 kb on - strand, within H281DRAFT_04338 at 54.398 kb on - strand, within H281DRAFT_04338 at 54.431 kb on + strand, within H281DRAFT_04338 at 54.432 kb on - strand, within H281DRAFT_04338 at 54.497 kb on - strand, within H281DRAFT_04338 at 54.637 kb on + strand, within H281DRAFT_04338 at 54.637 kb on + strand, within H281DRAFT_04338 at 54.637 kb on + strand, within H281DRAFT_04338 at 54.637 kb on + strand, within H281DRAFT_04338 at 54.638 kb on - strand, within H281DRAFT_04338 at 54.638 kb on - strand, within H281DRAFT_04338 at 54.638 kb on - strand, within H281DRAFT_04338 at 54.638 kb on - strand, within H281DRAFT_04338 at 54.956 kb on + strand at 55.117 kb on + strand, within H281DRAFT_04338 at 55.118 kb on - strand, within H281DRAFT_04338 at 55.118 kb on - strand, within H281DRAFT_04338 at 55.367 kb on + strand at 55.502 kb on + strand at 56.249 kb on - strand, within H281DRAFT_04339 at 56.249 kb on - strand, within H281DRAFT_04339
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 53,435 + +0.1 53,436 - +0.4 53,451 + -2.4 53,452 - +0.6 53,520 - +1.1 53,609 + +1.2 53,696 + H281DRAFT_04337 0.23 +0.9 53,697 - H281DRAFT_04337 0.23 -0.4 53,697 - H281DRAFT_04337 0.23 +0.8 53,993 + H281DRAFT_04337 0.69 +0.5 54,211 + +2.0 54,211 + +2.0 54,397 + H281DRAFT_04338 0.18 +2.2 54,398 - H281DRAFT_04338 0.18 +2.1 54,398 - H281DRAFT_04338 0.18 +0.7 54,431 + H281DRAFT_04338 0.21 +1.8 54,432 - H281DRAFT_04338 0.21 +1.7 54,497 - H281DRAFT_04338 0.27 +1.5 54,637 + H281DRAFT_04338 0.40 +1.1 54,637 + H281DRAFT_04338 0.40 +2.3 54,637 + H281DRAFT_04338 0.40 -0.3 54,637 + H281DRAFT_04338 0.40 +1.2 54,638 - H281DRAFT_04338 0.40 +1.9 54,638 - H281DRAFT_04338 0.40 +2.0 54,638 - H281DRAFT_04338 0.40 +2.1 54,638 - H281DRAFT_04338 0.40 +1.1 54,956 + +0.7 55,117 + H281DRAFT_04338 0.83 +2.1 55,118 - H281DRAFT_04338 0.83 +1.6 55,118 - H281DRAFT_04338 0.83 +2.3 55,367 + -0.5 55,502 + -1.3 56,249 - H281DRAFT_04339 0.23 -1.5 56,249 - H281DRAFT_04339 0.23 -0.6
Or see this region's nucleotide sequence