Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04086 and H281DRAFT_04087 are separated by 725 nucleotides H281DRAFT_04087 and H281DRAFT_04088 are separated by 379 nucleotides
H281DRAFT_04086: H281DRAFT_04086 - 23S rRNA pseudouridine2457 synthase, at 190,786 to 191,448
_04086
H281DRAFT_04087: H281DRAFT_04087 - hypothetical protein, at 192,174 to 192,689
_04087
H281DRAFT_04088: H281DRAFT_04088 - translation elongation factor 2 (EF-2/EF-G), at 193,069 to 195,174
_04088
Position (kb) 192
193 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 191.191 kb on + strand, within H281DRAFT_04086 at 191.209 kb on - strand, within H281DRAFT_04086 at 191.454 kb on + strand at 191.615 kb on + strand at 191.637 kb on - strand at 191.670 kb on + strand at 191.671 kb on - strand at 191.791 kb on - strand at 191.807 kb on + strand at 191.808 kb on - strand at 191.811 kb on + strand at 191.811 kb on + strand at 191.812 kb on - strand at 191.812 kb on - strand at 191.812 kb on - strand at 191.812 kb on - strand at 191.815 kb on + strand at 191.816 kb on - strand at 191.816 kb on - strand at 192.028 kb on - strand at 192.075 kb on + strand at 192.151 kb on + strand at 192.518 kb on + strand, within H281DRAFT_04087 at 192.644 kb on + strand at 192.816 kb on - strand at 192.816 kb on - strand at 192.978 kb on - strand at 192.980 kb on + strand at 192.981 kb on - strand at 192.986 kb on + strand at 192.987 kb on - strand at 192.987 kb on - strand at 193.051 kb on + strand at 193.104 kb on + strand at 193.104 kb on + strand at 193.165 kb on + strand at 193.166 kb on - strand at 193.257 kb on + strand at 193.290 kb on + strand, within H281DRAFT_04088 at 193.290 kb on + strand, within H281DRAFT_04088 at 193.291 kb on - strand, within H281DRAFT_04088 at 193.406 kb on - strand at 193.465 kb on + strand, within H281DRAFT_04088 at 193.465 kb on + strand, within H281DRAFT_04088 at 193.465 kb on + strand, within H281DRAFT_04088 at 193.466 kb on - strand, within H281DRAFT_04088
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 191,191 + H281DRAFT_04086 0.61 +0.5 191,209 - H281DRAFT_04086 0.64 +1.0 191,454 + -0.2 191,615 + -2.2 191,637 - +0.3 191,670 + +0.6 191,671 - +0.0 191,791 - +0.3 191,807 + -0.6 191,808 - -0.1 191,811 + +0.5 191,811 + -0.8 191,812 - -0.4 191,812 - +1.1 191,812 - +0.1 191,812 - -0.5 191,815 + -0.3 191,816 - -0.6 191,816 - -0.9 192,028 - -0.3 192,075 + -0.2 192,151 + -1.0 192,518 + H281DRAFT_04087 0.67 +1.1 192,644 + +2.1 192,816 - -1.1 192,816 - -1.8 192,978 - +0.2 192,980 + -0.1 192,981 - -0.8 192,986 + -0.6 192,987 - +0.9 192,987 - +0.5 193,051 + -0.3 193,104 + -2.9 193,104 + -0.2 193,165 + +0.1 193,166 - +0.4 193,257 + +0.4 193,290 + H281DRAFT_04088 0.10 -0.2 193,290 + H281DRAFT_04088 0.10 +0.0 193,291 - H281DRAFT_04088 0.11 +0.3 193,406 - -0.7 193,465 + H281DRAFT_04088 0.19 -1.2 193,465 + H281DRAFT_04088 0.19 -2.4 193,465 + H281DRAFT_04088 0.19 -0.4 193,466 - H281DRAFT_04088 0.19 -3.1
Or see this region's nucleotide sequence