Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03753 and H281DRAFT_03754 are separated by 73 nucleotides H281DRAFT_03754 and H281DRAFT_03755 are separated by 43 nucleotides H281DRAFT_03755 and H281DRAFT_03756 are separated by 181 nucleotides
H281DRAFT_03753: H281DRAFT_03753 - Glyoxylase, beta-lactamase superfamily II, at 269,111 to 270,070
_03753
H281DRAFT_03754: H281DRAFT_03754 - 3-(3-hydroxy-phenyl)propionate hydroxylase, at 270,144 to 271,862
_03754
H281DRAFT_03755: H281DRAFT_03755 - Protein of unknown function (DUF2783), at 271,906 to 272,142
_03755
H281DRAFT_03756: H281DRAFT_03756 - D-galactonate transporter, at 272,324 to 273,646
_03756
Position (kb) 270
271
272 Strain fitness (log2 ratio) -1
0
1 at 269.330 kb on + strand, within H281DRAFT_03753 at 269.348 kb on + strand, within H281DRAFT_03753 at 269.676 kb on - strand, within H281DRAFT_03753 at 270.084 kb on - strand at 270.084 kb on - strand at 270.156 kb on + strand at 270.322 kb on + strand, within H281DRAFT_03754 at 270.477 kb on + strand, within H281DRAFT_03754 at 270.711 kb on + strand, within H281DRAFT_03754 at 270.711 kb on + strand, within H281DRAFT_03754 at 270.712 kb on - strand, within H281DRAFT_03754 at 271.230 kb on + strand, within H281DRAFT_03754 at 271.230 kb on + strand, within H281DRAFT_03754 at 272.289 kb on + strand at 272.289 kb on + strand at 272.543 kb on + strand, within H281DRAFT_03756 at 272.553 kb on - strand, within H281DRAFT_03756 at 272.860 kb on + strand, within H281DRAFT_03756
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 269,330 + H281DRAFT_03753 0.23 -1.5 269,348 + H281DRAFT_03753 0.25 -0.4 269,676 - H281DRAFT_03753 0.59 +0.2 270,084 - +1.1 270,084 - +0.2 270,156 + +1.5 270,322 + H281DRAFT_03754 0.10 -0.4 270,477 + H281DRAFT_03754 0.19 +0.3 270,711 + H281DRAFT_03754 0.33 +0.9 270,711 + H281DRAFT_03754 0.33 +0.1 270,712 - H281DRAFT_03754 0.33 +0.3 271,230 + H281DRAFT_03754 0.63 -0.1 271,230 + H281DRAFT_03754 0.63 +1.0 272,289 + +1.4 272,289 + -1.1 272,543 + H281DRAFT_03756 0.17 -0.4 272,553 - H281DRAFT_03756 0.17 +0.7 272,860 + H281DRAFT_03756 0.41 +0.9
Or see this region's nucleotide sequence