Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02724 and H281DRAFT_02725 are separated by 73 nucleotides H281DRAFT_02725 and H281DRAFT_02726 overlap by 11 nucleotides
H281DRAFT_02724: H281DRAFT_02724 - Beta-lactamase class C and other penicillin binding proteins, at 309,263 to 310,315
_02724
H281DRAFT_02725: H281DRAFT_02725 - MFS transporter, MHS family, proline/betaine transporter, at 310,389 to 311,678
_02725
H281DRAFT_02726: H281DRAFT_02726 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, at 311,668 to 313,116
_02726
Position (kb) 310
311
312 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 309.403 kb on - strand, within H281DRAFT_02724 at 309.466 kb on - strand, within H281DRAFT_02724 at 309.497 kb on - strand, within H281DRAFT_02724 at 309.811 kb on - strand, within H281DRAFT_02724 at 309.885 kb on + strand, within H281DRAFT_02724 at 309.886 kb on - strand, within H281DRAFT_02724 at 310.077 kb on + strand, within H281DRAFT_02724 at 310.077 kb on + strand, within H281DRAFT_02724 at 310.482 kb on - strand at 310.482 kb on - strand at 310.552 kb on + strand, within H281DRAFT_02725 at 310.553 kb on - strand, within H281DRAFT_02725 at 310.627 kb on + strand, within H281DRAFT_02725 at 310.759 kb on - strand, within H281DRAFT_02725 at 310.880 kb on - strand, within H281DRAFT_02725 at 310.890 kb on - strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.903 kb on + strand, within H281DRAFT_02725 at 310.904 kb on - strand, within H281DRAFT_02725 at 311.422 kb on + strand, within H281DRAFT_02725 at 311.487 kb on - strand, within H281DRAFT_02725 at 311.551 kb on + strand at 311.552 kb on - strand at 311.557 kb on + strand at 311.557 kb on + strand at 311.672 kb on + strand at 311.672 kb on + strand at 311.673 kb on - strand at 312.365 kb on - strand, within H281DRAFT_02726 at 312.496 kb on + strand, within H281DRAFT_02726
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 309,403 - H281DRAFT_02724 0.13 -0.6 309,466 - H281DRAFT_02724 0.19 -0.7 309,497 - H281DRAFT_02724 0.22 -1.5 309,811 - H281DRAFT_02724 0.52 +0.2 309,885 + H281DRAFT_02724 0.59 +0.0 309,886 - H281DRAFT_02724 0.59 +2.4 310,077 + H281DRAFT_02724 0.77 +1.5 310,077 + H281DRAFT_02724 0.77 -0.0 310,482 - -0.2 310,482 - +0.4 310,552 + H281DRAFT_02725 0.13 -0.3 310,553 - H281DRAFT_02725 0.13 -0.0 310,627 + H281DRAFT_02725 0.18 +0.2 310,759 - H281DRAFT_02725 0.29 +0.0 310,880 - H281DRAFT_02725 0.38 -1.2 310,890 - H281DRAFT_02725 0.39 +0.4 310,891 + H281DRAFT_02725 0.39 +0.1 310,891 + H281DRAFT_02725 0.39 +0.0 310,892 - H281DRAFT_02725 0.39 +0.1 310,892 - H281DRAFT_02725 0.39 +1.1 310,903 + H281DRAFT_02725 0.40 +0.8 310,904 - H281DRAFT_02725 0.40 +0.1 311,422 + H281DRAFT_02725 0.80 -1.6 311,487 - H281DRAFT_02725 0.85 +0.1 311,551 + -1.3 311,552 - -0.1 311,557 + +1.1 311,557 + +1.3 311,672 + +0.7 311,672 + -0.1 311,673 - +0.3 312,365 - H281DRAFT_02726 0.48 +1.4 312,496 + H281DRAFT_02726 0.57 -3.3
Or see this region's nucleotide sequence