Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02475 and H281DRAFT_02476 are separated by 36 nucleotides H281DRAFT_02476 and H281DRAFT_02477 are separated by 167 nucleotides
H281DRAFT_02475: H281DRAFT_02475 - Rieske 2Fe-2S family protein, at 46,238 to 47,542
_02475
H281DRAFT_02476: H281DRAFT_02476 - Ferredoxin-NADP reductase, at 47,579 to 48,829
_02476
H281DRAFT_02477: H281DRAFT_02477 - glycine betaine/proline transport system substrate-binding protein, at 48,997 to 49,854
_02477
Position (kb) 47
48
49 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 46.606 kb on + strand, within H281DRAFT_02475 at 46.681 kb on + strand, within H281DRAFT_02475 at 46.682 kb on - strand, within H281DRAFT_02475 at 46.844 kb on + strand, within H281DRAFT_02475 at 46.912 kb on + strand, within H281DRAFT_02475 at 47.197 kb on + strand, within H281DRAFT_02475 at 47.197 kb on + strand, within H281DRAFT_02475 at 47.198 kb on - strand, within H281DRAFT_02475 at 47.200 kb on - strand, within H281DRAFT_02475 at 47.357 kb on + strand, within H281DRAFT_02475 at 47.387 kb on + strand, within H281DRAFT_02475 at 47.644 kb on + strand at 47.849 kb on + strand, within H281DRAFT_02476 at 47.852 kb on - strand, within H281DRAFT_02476 at 47.894 kb on - strand, within H281DRAFT_02476 at 48.142 kb on + strand, within H281DRAFT_02476 at 48.143 kb on - strand, within H281DRAFT_02476 at 48.329 kb on + strand, within H281DRAFT_02476 at 48.343 kb on - strand, within H281DRAFT_02476 at 48.905 kb on + strand at 48.905 kb on + strand at 48.905 kb on + strand at 48.906 kb on - strand at 49.062 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 46,606 + H281DRAFT_02475 0.28 -0.2 46,681 + H281DRAFT_02475 0.34 -2.3 46,682 - H281DRAFT_02475 0.34 +0.8 46,844 + H281DRAFT_02475 0.46 +0.0 46,912 + H281DRAFT_02475 0.52 -1.1 47,197 + H281DRAFT_02475 0.73 -3.9 47,197 + H281DRAFT_02475 0.73 -0.9 47,198 - H281DRAFT_02475 0.74 -1.6 47,200 - H281DRAFT_02475 0.74 +0.5 47,357 + H281DRAFT_02475 0.86 -1.0 47,387 + H281DRAFT_02475 0.88 +0.1 47,644 + +0.3 47,849 + H281DRAFT_02476 0.22 -1.1 47,852 - H281DRAFT_02476 0.22 -0.1 47,894 - H281DRAFT_02476 0.25 +0.2 48,142 + H281DRAFT_02476 0.45 -1.4 48,143 - H281DRAFT_02476 0.45 -0.3 48,329 + H281DRAFT_02476 0.60 -0.3 48,343 - H281DRAFT_02476 0.61 -0.7 48,905 + +0.5 48,905 + -2.4 48,905 + +0.1 48,906 - -0.3 49,062 - +2.6
Or see this region's nucleotide sequence