Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02125 and H281DRAFT_02126 are separated by 67 nucleotides H281DRAFT_02126 and H281DRAFT_02127 are separated by 166 nucleotides
H281DRAFT_02125: H281DRAFT_02125 - sodium/proton antiporter, CPA1 family, at 257,255 to 259,147
_02125
H281DRAFT_02126: H281DRAFT_02126 - uracil-xanthine permease, at 259,215 to 260,522
_02126
H281DRAFT_02127: H281DRAFT_02127 - methyl-accepting chemotaxis protein, at 260,689 to 262,254
_02127
Position (kb) 259
260
261 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 258.258 kb on - strand, within H281DRAFT_02125 at 258.258 kb on - strand, within H281DRAFT_02125 at 258.310 kb on + strand, within H281DRAFT_02125 at 258.311 kb on - strand, within H281DRAFT_02125 at 258.446 kb on + strand, within H281DRAFT_02125 at 258.474 kb on - strand, within H281DRAFT_02125 at 258.748 kb on - strand, within H281DRAFT_02125 at 258.837 kb on + strand, within H281DRAFT_02125 at 258.890 kb on + strand, within H281DRAFT_02125 at 258.890 kb on + strand, within H281DRAFT_02125 at 258.890 kb on + strand, within H281DRAFT_02125 at 258.927 kb on - strand, within H281DRAFT_02125 at 258.927 kb on - strand, within H281DRAFT_02125 at 259.192 kb on + strand at 259.193 kb on - strand at 259.565 kb on - strand, within H281DRAFT_02126 at 259.565 kb on - strand, within H281DRAFT_02126 at 259.565 kb on - strand, within H281DRAFT_02126 at 259.603 kb on + strand, within H281DRAFT_02126 at 259.603 kb on + strand, within H281DRAFT_02126 at 259.679 kb on + strand at 259.681 kb on + strand, within H281DRAFT_02126 at 259.714 kb on - strand, within H281DRAFT_02126 at 259.903 kb on + strand at 259.903 kb on + strand, within H281DRAFT_02126 at 259.904 kb on - strand, within H281DRAFT_02126 at 259.904 kb on - strand, within H281DRAFT_02126 at 260.043 kb on - strand, within H281DRAFT_02126 at 260.155 kb on + strand, within H281DRAFT_02126 at 260.275 kb on + strand, within H281DRAFT_02126 at 260.276 kb on - strand, within H281DRAFT_02126 at 260.276 kb on - strand, within H281DRAFT_02126 at 260.591 kb on + strand at 260.591 kb on + strand at 260.603 kb on + strand at 261.322 kb on + strand, within H281DRAFT_02127
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 258,258 - H281DRAFT_02125 0.53 +0.1 258,258 - H281DRAFT_02125 0.53 -0.3 258,310 + H281DRAFT_02125 0.56 +0.3 258,311 - H281DRAFT_02125 0.56 -1.8 258,446 + H281DRAFT_02125 0.63 +0.7 258,474 - H281DRAFT_02125 0.64 -1.8 258,748 - H281DRAFT_02125 0.79 -0.1 258,837 + H281DRAFT_02125 0.84 -2.3 258,890 + H281DRAFT_02125 0.86 -0.5 258,890 + H281DRAFT_02125 0.86 -1.1 258,890 + H281DRAFT_02125 0.86 -0.7 258,927 - H281DRAFT_02125 0.88 +0.1 258,927 - H281DRAFT_02125 0.88 -3.4 259,192 + +1.5 259,193 - -0.1 259,565 - H281DRAFT_02126 0.27 +1.1 259,565 - H281DRAFT_02126 0.27 -1.2 259,565 - H281DRAFT_02126 0.27 +0.6 259,603 + H281DRAFT_02126 0.30 +0.2 259,603 + H281DRAFT_02126 0.30 +0.1 259,679 + +1.6 259,681 + H281DRAFT_02126 0.36 -3.3 259,714 - H281DRAFT_02126 0.38 -2.3 259,903 + +0.3 259,903 + H281DRAFT_02126 0.53 +0.3 259,904 - H281DRAFT_02126 0.53 -0.2 259,904 - H281DRAFT_02126 0.53 +0.1 260,043 - H281DRAFT_02126 0.63 +1.0 260,155 + H281DRAFT_02126 0.72 -0.3 260,275 + H281DRAFT_02126 0.81 +0.3 260,276 - H281DRAFT_02126 0.81 -0.8 260,276 - H281DRAFT_02126 0.81 -0.5 260,591 + -1.0 260,591 + +0.4 260,603 + +0.8 261,322 + H281DRAFT_02127 0.40 -0.0
Or see this region's nucleotide sequence