Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02031 and H281DRAFT_02032 are separated by 9 nucleotides
H281DRAFT_02031: H281DRAFT_02031 - hypothetical protein, at 151,543 to 152,898
_02031
H281DRAFT_02032: H281DRAFT_02032 - hypothetical protein, at 152,908 to 154,626
_02032
Position (kb) 151
152
153 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 150.558 kb on - strand at 150.558 kb on - strand at 150.558 kb on - strand at 150.567 kb on + strand at 150.574 kb on + strand at 150.574 kb on + strand at 150.574 kb on + strand at 150.583 kb on + strand at 150.621 kb on + strand at 150.622 kb on - strand at 150.622 kb on - strand at 150.631 kb on + strand at 150.631 kb on + strand at 150.658 kb on + strand at 150.659 kb on - strand at 150.661 kb on + strand at 150.661 kb on + strand at 150.662 kb on - strand at 150.727 kb on + strand at 150.735 kb on - strand at 150.745 kb on + strand at 150.745 kb on + strand at 150.761 kb on + strand at 150.762 kb on - strand at 150.823 kb on + strand at 150.873 kb on - strand at 150.921 kb on + strand at 150.921 kb on + strand at 150.921 kb on + strand at 150.921 kb on + strand at 150.922 kb on - strand at 150.922 kb on - strand at 150.952 kb on + strand at 150.952 kb on + strand at 150.953 kb on - strand at 150.953 kb on - strand at 151.069 kb on - strand at 151.092 kb on - strand at 151.117 kb on + strand at 151.117 kb on + strand at 151.117 kb on + strand at 151.117 kb on + strand at 151.137 kb on - strand at 151.174 kb on + strand at 151.175 kb on - strand at 151.210 kb on + strand at 151.243 kb on + strand at 151.244 kb on - strand at 151.244 kb on - strand at 151.371 kb on + strand at 151.371 kb on + strand at 151.371 kb on + strand at 151.372 kb on - strand at 151.372 kb on - strand at 151.372 kb on - strand at 151.375 kb on + strand at 151.375 kb on + strand at 151.375 kb on + strand at 151.375 kb on + strand at 151.376 kb on - strand at 151.376 kb on - strand at 151.421 kb on + strand at 151.421 kb on + strand at 151.421 kb on + strand at 151.421 kb on + strand at 151.422 kb on - strand at 151.422 kb on - strand at 151.427 kb on - strand at 151.427 kb on - strand at 151.427 kb on - strand at 151.486 kb on + strand at 151.486 kb on + strand at 151.486 kb on + strand at 151.486 kb on + strand at 151.487 kb on - strand at 151.521 kb on + strand at 151.532 kb on + strand at 151.532 kb on + strand at 151.532 kb on + strand at 151.532 kb on + strand at 151.533 kb on - strand at 151.552 kb on + strand at 151.606 kb on + strand at 151.606 kb on + strand at 151.606 kb on + strand at 151.614 kb on + strand at 151.614 kb on + strand at 151.614 kb on + strand at 151.615 kb on - strand at 151.617 kb on + strand at 151.617 kb on + strand at 151.655 kb on + strand at 151.656 kb on - strand at 151.656 kb on - strand at 151.656 kb on - strand at 151.656 kb on - strand at 151.722 kb on + strand, within H281DRAFT_02031 at 151.722 kb on + strand, within H281DRAFT_02031 at 151.722 kb on + strand, within H281DRAFT_02031 at 151.722 kb on + strand, within H281DRAFT_02031 at 151.723 kb on - strand, within H281DRAFT_02031 at 151.723 kb on - strand, within H281DRAFT_02031 at 151.785 kb on + strand, within H281DRAFT_02031 at 151.785 kb on + strand, within H281DRAFT_02031 at 151.786 kb on - strand, within H281DRAFT_02031 at 151.858 kb on + strand, within H281DRAFT_02031 at 151.858 kb on + strand, within H281DRAFT_02031 at 151.858 kb on + strand, within H281DRAFT_02031 at 151.892 kb on - strand, within H281DRAFT_02031 at 151.947 kb on + strand, within H281DRAFT_02031 at 151.947 kb on + strand, within H281DRAFT_02031 at 151.957 kb on - strand, within H281DRAFT_02031 at 151.957 kb on - strand, within H281DRAFT_02031 at 152.035 kb on + strand, within H281DRAFT_02031 at 152.095 kb on + strand, within H281DRAFT_02031 at 152.095 kb on + strand, within H281DRAFT_02031 at 152.096 kb on - strand, within H281DRAFT_02031 at 152.102 kb on + strand, within H281DRAFT_02031 at 152.102 kb on + strand, within H281DRAFT_02031 at 152.102 kb on + strand, within H281DRAFT_02031 at 152.102 kb on + strand, within H281DRAFT_02031 at 152.102 kb on + strand at 152.102 kb on + strand, within H281DRAFT_02031 at 152.103 kb on - strand, within H281DRAFT_02031 at 152.103 kb on - strand, within H281DRAFT_02031 at 152.103 kb on - strand, within H281DRAFT_02031 at 152.103 kb on - strand, within H281DRAFT_02031 at 152.143 kb on + strand, within H281DRAFT_02031 at 152.143 kb on + strand, within H281DRAFT_02031 at 152.144 kb on - strand, within H281DRAFT_02031 at 152.144 kb on - strand, within H281DRAFT_02031 at 152.148 kb on - strand at 152.148 kb on - strand, within H281DRAFT_02031 at 152.193 kb on - strand, within H281DRAFT_02031 at 152.220 kb on - strand, within H281DRAFT_02031 at 152.238 kb on + strand at 152.279 kb on - strand, within H281DRAFT_02031 at 152.312 kb on + strand, within H281DRAFT_02031 at 152.313 kb on - strand, within H281DRAFT_02031 at 152.313 kb on - strand, within H281DRAFT_02031 at 152.313 kb on - strand, within H281DRAFT_02031 at 152.313 kb on - strand, within H281DRAFT_02031 at 152.377 kb on + strand, within H281DRAFT_02031 at 152.378 kb on - strand, within H281DRAFT_02031 at 152.425 kb on + strand, within H281DRAFT_02031 at 152.425 kb on + strand, within H281DRAFT_02031 at 152.426 kb on - strand, within H281DRAFT_02031 at 152.452 kb on + strand, within H281DRAFT_02031 at 152.453 kb on - strand, within H281DRAFT_02031 at 152.465 kb on + strand, within H281DRAFT_02031 at 152.465 kb on + strand, within H281DRAFT_02031 at 152.465 kb on + strand, within H281DRAFT_02031 at 152.465 kb on + strand, within H281DRAFT_02031 at 152.466 kb on - strand, within H281DRAFT_02031 at 152.513 kb on + strand, within H281DRAFT_02031 at 152.573 kb on + strand, within H281DRAFT_02031 at 152.573 kb on + strand, within H281DRAFT_02031 at 152.574 kb on - strand, within H281DRAFT_02031 at 152.574 kb on - strand, within H281DRAFT_02031 at 152.574 kb on - strand, within H281DRAFT_02031 at 152.635 kb on + strand, within H281DRAFT_02031 at 152.635 kb on + strand, within H281DRAFT_02031 at 152.636 kb on - strand, within H281DRAFT_02031 at 152.636 kb on - strand, within H281DRAFT_02031 at 152.636 kb on - strand, within H281DRAFT_02031 at 152.642 kb on - strand, within H281DRAFT_02031 at 152.642 kb on - strand, within H281DRAFT_02031 at 152.642 kb on - strand, within H281DRAFT_02031 at 152.651 kb on - strand, within H281DRAFT_02031 at 152.667 kb on + strand, within H281DRAFT_02031 at 152.668 kb on - strand, within H281DRAFT_02031 at 152.668 kb on - strand, within H281DRAFT_02031 at 152.671 kb on + strand, within H281DRAFT_02031 at 152.690 kb on - strand, within H281DRAFT_02031 at 152.690 kb on - strand, within H281DRAFT_02031 at 152.759 kb on + strand, within H281DRAFT_02031 at 152.815 kb on - strand at 152.835 kb on - strand at 152.836 kb on + strand at 152.837 kb on - strand at 152.837 kb on - strand at 152.855 kb on + strand at 152.855 kb on + strand at 152.855 kb on + strand at 152.974 kb on + strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.997 kb on + strand at 152.998 kb on - strand at 152.998 kb on - strand at 153.020 kb on + strand at 153.022 kb on + strand at 153.022 kb on + strand at 153.022 kb on + strand at 153.022 kb on + strand at 153.023 kb on - strand at 153.023 kb on - strand at 153.041 kb on + strand at 153.041 kb on + strand at 153.057 kb on - strand at 153.057 kb on - strand at 153.136 kb on - strand, within H281DRAFT_02032 at 153.142 kb on - strand, within H281DRAFT_02032 at 153.172 kb on + strand, within H281DRAFT_02032 at 153.192 kb on + strand, within H281DRAFT_02032 at 153.193 kb on - strand, within H281DRAFT_02032 at 153.196 kb on - strand, within H281DRAFT_02032 at 153.317 kb on - strand, within H281DRAFT_02032 at 153.322 kb on + strand, within H281DRAFT_02032 at 153.353 kb on - strand, within H281DRAFT_02032 at 153.388 kb on - strand, within H281DRAFT_02032 at 153.389 kb on + strand, within H281DRAFT_02032 at 153.393 kb on + strand, within H281DRAFT_02032 at 153.393 kb on + strand, within H281DRAFT_02032 at 153.393 kb on + strand, within H281DRAFT_02032 at 153.394 kb on - strand, within H281DRAFT_02032 at 153.394 kb on - strand, within H281DRAFT_02032 at 153.400 kb on - strand, within H281DRAFT_02032 at 153.400 kb on - strand, within H281DRAFT_02032 at 153.400 kb on - strand, within H281DRAFT_02032 at 153.400 kb on - strand, within H281DRAFT_02032 at 153.459 kb on + strand, within H281DRAFT_02032 at 153.459 kb on + strand, within H281DRAFT_02032 at 153.459 kb on + strand, within H281DRAFT_02032 at 153.460 kb on - strand, within H281DRAFT_02032 at 153.480 kb on + strand, within H281DRAFT_02032 at 153.480 kb on + strand, within H281DRAFT_02032 at 153.497 kb on - strand, within H281DRAFT_02032 at 153.542 kb on + strand, within H281DRAFT_02032 at 153.601 kb on + strand, within H281DRAFT_02032 at 153.602 kb on - strand, within H281DRAFT_02032 at 153.681 kb on + strand, within H281DRAFT_02032 at 153.681 kb on + strand at 153.682 kb on - strand, within H281DRAFT_02032
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 150,558 - +0.1 150,558 - -1.7 150,558 - +0.7 150,567 + -0.6 150,574 + +0.1 150,574 + +0.5 150,574 + +0.7 150,583 + +0.2 150,621 + +0.2 150,622 - +0.0 150,622 - +0.3 150,631 + -0.4 150,631 + -0.6 150,658 + -0.3 150,659 - +0.7 150,661 + +0.3 150,661 + -0.5 150,662 - -0.4 150,727 + +0.3 150,735 - +0.1 150,745 + +0.2 150,745 + -0.7 150,761 + +0.6 150,762 - +0.2 150,823 + -0.3 150,873 - -0.4 150,921 + -0.7 150,921 + +0.2 150,921 + +0.6 150,921 + +0.9 150,922 - -2.0 150,922 - -0.8 150,952 + +0.6 150,952 + +0.7 150,953 - -0.0 150,953 - -0.2 151,069 - -0.4 151,092 - -0.3 151,117 + -1.2 151,117 + +0.2 151,117 + -0.1 151,117 + +0.1 151,137 - +0.3 151,174 + +0.1 151,175 - +1.0 151,210 + -0.9 151,243 + -0.2 151,244 - +0.7 151,244 - +0.7 151,371 + +0.5 151,371 + +0.0 151,371 + -0.6 151,372 - -0.1 151,372 - -0.7 151,372 - -2.1 151,375 + +0.1 151,375 + +0.1 151,375 + +1.6 151,375 + +1.6 151,376 - -0.7 151,376 - -0.5 151,421 + +0.7 151,421 + -0.0 151,421 + +0.9 151,421 + +0.3 151,422 - +0.1 151,422 - +0.1 151,427 - +1.2 151,427 - -0.5 151,427 - +0.4 151,486 + +1.0 151,486 + -0.6 151,486 + +0.8 151,486 + +0.2 151,487 - +1.1 151,521 + +0.2 151,532 + +0.6 151,532 + +0.4 151,532 + -0.1 151,532 + +1.1 151,533 - +0.3 151,552 + -0.2 151,606 + +1.9 151,606 + -0.8 151,606 + +0.8 151,614 + -1.9 151,614 + -0.1 151,614 + +0.9 151,615 - -1.5 151,617 + +0.2 151,617 + -0.2 151,655 + -0.4 151,656 - -0.9 151,656 - +1.2 151,656 - +0.5 151,656 - +1.3 151,722 + H281DRAFT_02031 0.13 +0.5 151,722 + H281DRAFT_02031 0.13 +0.9 151,722 + H281DRAFT_02031 0.13 +0.2 151,722 + H281DRAFT_02031 0.13 +0.3 151,723 - H281DRAFT_02031 0.13 -2.5 151,723 - H281DRAFT_02031 0.13 -0.5 151,785 + H281DRAFT_02031 0.18 +0.6 151,785 + H281DRAFT_02031 0.18 +0.4 151,786 - H281DRAFT_02031 0.18 +0.9 151,858 + H281DRAFT_02031 0.23 +0.1 151,858 + H281DRAFT_02031 0.23 +1.3 151,858 + H281DRAFT_02031 0.23 +0.0 151,892 - H281DRAFT_02031 0.26 -0.1 151,947 + H281DRAFT_02031 0.30 -0.2 151,947 + H281DRAFT_02031 0.30 -0.2 151,957 - H281DRAFT_02031 0.31 -0.8 151,957 - H281DRAFT_02031 0.31 +0.1 152,035 + H281DRAFT_02031 0.36 +0.3 152,095 + H281DRAFT_02031 0.41 +0.1 152,095 + H281DRAFT_02031 0.41 +0.7 152,096 - H281DRAFT_02031 0.41 +1.3 152,102 + H281DRAFT_02031 0.41 -3.5 152,102 + H281DRAFT_02031 0.41 -0.2 152,102 + H281DRAFT_02031 0.41 +1.3 152,102 + H281DRAFT_02031 0.41 -0.7 152,102 + +0.5 152,102 + H281DRAFT_02031 0.41 -0.3 152,103 - H281DRAFT_02031 0.41 +0.9 152,103 - H281DRAFT_02031 0.41 -2.0 152,103 - H281DRAFT_02031 0.41 +0.6 152,103 - H281DRAFT_02031 0.41 +0.8 152,143 + H281DRAFT_02031 0.44 -0.6 152,143 + H281DRAFT_02031 0.44 +0.4 152,144 - H281DRAFT_02031 0.44 +0.3 152,144 - H281DRAFT_02031 0.44 -1.0 152,148 - -0.4 152,148 - H281DRAFT_02031 0.45 +0.0 152,193 - H281DRAFT_02031 0.48 +0.3 152,220 - H281DRAFT_02031 0.50 -0.3 152,238 + +0.6 152,279 - H281DRAFT_02031 0.54 +0.9 152,312 + H281DRAFT_02031 0.57 +0.3 152,313 - H281DRAFT_02031 0.57 +0.9 152,313 - H281DRAFT_02031 0.57 -0.3 152,313 - H281DRAFT_02031 0.57 +0.9 152,313 - H281DRAFT_02031 0.57 -0.6 152,377 + H281DRAFT_02031 0.62 -0.1 152,378 - H281DRAFT_02031 0.62 +1.4 152,425 + H281DRAFT_02031 0.65 +1.0 152,425 + H281DRAFT_02031 0.65 +0.3 152,426 - H281DRAFT_02031 0.65 +0.4 152,452 + H281DRAFT_02031 0.67 +0.6 152,453 - H281DRAFT_02031 0.67 +1.5 152,465 + H281DRAFT_02031 0.68 +0.3 152,465 + H281DRAFT_02031 0.68 -0.6 152,465 + H281DRAFT_02031 0.68 +0.9 152,465 + H281DRAFT_02031 0.68 +0.4 152,466 - H281DRAFT_02031 0.68 -0.0 152,513 + H281DRAFT_02031 0.72 -0.5 152,573 + H281DRAFT_02031 0.76 +2.6 152,573 + H281DRAFT_02031 0.76 -1.6 152,574 - H281DRAFT_02031 0.76 +1.5 152,574 - H281DRAFT_02031 0.76 -0.1 152,574 - H281DRAFT_02031 0.76 +0.7 152,635 + H281DRAFT_02031 0.81 +0.6 152,635 + H281DRAFT_02031 0.81 +0.6 152,636 - H281DRAFT_02031 0.81 -0.9 152,636 - H281DRAFT_02031 0.81 +0.6 152,636 - H281DRAFT_02031 0.81 -2.8 152,642 - H281DRAFT_02031 0.81 +0.9 152,642 - H281DRAFT_02031 0.81 -0.0 152,642 - H281DRAFT_02031 0.81 +0.3 152,651 - H281DRAFT_02031 0.82 +1.3 152,667 + H281DRAFT_02031 0.83 +0.1 152,668 - H281DRAFT_02031 0.83 +1.3 152,668 - H281DRAFT_02031 0.83 -0.5 152,671 + H281DRAFT_02031 0.83 -0.7 152,690 - H281DRAFT_02031 0.85 +0.4 152,690 - H281DRAFT_02031 0.85 +0.1 152,759 + H281DRAFT_02031 0.90 +0.6 152,815 - +0.3 152,835 - +0.8 152,836 + +0.8 152,837 - -0.5 152,837 - -0.2 152,855 + +0.8 152,855 + -1.6 152,855 + +0.6 152,974 + -1.6 152,975 - +0.1 152,975 - -0.5 152,975 - -0.6 152,997 + -1.7 152,998 - +0.2 152,998 - +0.3 153,020 + -0.7 153,022 + -0.6 153,022 + +0.7 153,022 + +0.8 153,022 + +0.1 153,023 - -0.9 153,023 - -0.0 153,041 + -0.8 153,041 + +1.0 153,057 - -0.4 153,057 - +1.4 153,136 - H281DRAFT_02032 0.13 -1.5 153,142 - H281DRAFT_02032 0.14 -0.3 153,172 + H281DRAFT_02032 0.15 -0.0 153,192 + H281DRAFT_02032 0.17 +0.7 153,193 - H281DRAFT_02032 0.17 +0.3 153,196 - H281DRAFT_02032 0.17 -0.3 153,317 - H281DRAFT_02032 0.24 +0.2 153,322 + H281DRAFT_02032 0.24 -0.0 153,353 - H281DRAFT_02032 0.26 +1.9 153,388 - H281DRAFT_02032 0.28 +0.2 153,389 + H281DRAFT_02032 0.28 -0.0 153,393 + H281DRAFT_02032 0.28 +0.3 153,393 + H281DRAFT_02032 0.28 -1.2 153,393 + H281DRAFT_02032 0.28 -0.8 153,394 - H281DRAFT_02032 0.28 -0.1 153,394 - H281DRAFT_02032 0.28 -0.1 153,400 - H281DRAFT_02032 0.29 -0.3 153,400 - H281DRAFT_02032 0.29 +0.3 153,400 - H281DRAFT_02032 0.29 -0.1 153,400 - H281DRAFT_02032 0.29 +0.1 153,459 + H281DRAFT_02032 0.32 -0.3 153,459 + H281DRAFT_02032 0.32 +0.0 153,459 + H281DRAFT_02032 0.32 +0.1 153,460 - H281DRAFT_02032 0.32 -1.7 153,480 + H281DRAFT_02032 0.33 +0.1 153,480 + H281DRAFT_02032 0.33 -0.2 153,497 - H281DRAFT_02032 0.34 -0.3 153,542 + H281DRAFT_02032 0.37 +0.0 153,601 + H281DRAFT_02032 0.40 +0.3 153,602 - H281DRAFT_02032 0.40 -0.3 153,681 + H281DRAFT_02032 0.45 +0.9 153,681 + -2.1 153,682 - H281DRAFT_02032 0.45 +0.5
Or see this region's nucleotide sequence