Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01322 and H281DRAFT_01323 are separated by 13 nucleotides H281DRAFT_01323 and H281DRAFT_01324 are separated by 303 nucleotides
H281DRAFT_01322: H281DRAFT_01322 - Predicted ATP-dependent carboligase, ATP-grasp superfamily, at 162,509 to 163,642
_01322
H281DRAFT_01323: H281DRAFT_01323 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 163,656 to 164,402
_01323
H281DRAFT_01324: H281DRAFT_01324 - formylmethanofuran dehydrogenase, subunit B, at 164,706 to 166,124
_01324
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1 at 162.724 kb on - strand, within H281DRAFT_01322 at 163.818 kb on + strand, within H281DRAFT_01323 at 163.819 kb on - strand, within H281DRAFT_01323 at 163.819 kb on - strand, within H281DRAFT_01323 at 164.084 kb on - strand, within H281DRAFT_01323 at 164.208 kb on + strand, within H281DRAFT_01323 at 164.400 kb on + strand at 164.401 kb on - strand at 164.478 kb on - strand at 164.626 kb on + strand at 164.627 kb on - strand at 164.693 kb on + strand at 164.812 kb on + strand at 165.057 kb on + strand, within H281DRAFT_01324 at 165.058 kb on - strand, within H281DRAFT_01324 at 165.197 kb on - strand, within H281DRAFT_01324
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 162,724 - H281DRAFT_01322 0.19 +0.5 163,818 + H281DRAFT_01323 0.22 +0.5 163,819 - H281DRAFT_01323 0.22 +0.1 163,819 - H281DRAFT_01323 0.22 +0.5 164,084 - H281DRAFT_01323 0.57 -1.2 164,208 + H281DRAFT_01323 0.74 +0.2 164,400 + -0.8 164,401 - +1.4 164,478 - +0.7 164,626 + +0.9 164,627 - +0.4 164,693 + -1.8 164,812 + -0.5 165,057 + H281DRAFT_01324 0.25 -1.2 165,058 - H281DRAFT_01324 0.25 -0.1 165,197 - H281DRAFT_01324 0.35 +1.1
Or see this region's nucleotide sequence