Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_771 and HP15_772 are separated by 21 nucleotides HP15_772 and HP15_773 overlap by 17 nucleotides HP15_773 and HP15_774 are separated by 39 nucleotides HP15_774 and HP15_775 are separated by 56 nucleotides HP15_775 and HP15_776 are separated by 15 nucleotides
HP15_771: HP15_771 - glycine cleavage T-protein (aminomethyl transferase), at 782,092 to 783,087
_771
HP15_772: HP15_772 - conserved hypothetical protein, secreted, at 783,109 to 783,573
_772
HP15_773: HP15_773 - conserved hypothetical protein, at 783,557 to 783,829
_773
HP15_774: HP15_774 - L-aspartate oxidase, at 783,869 to 785,494
_774
HP15_775: HP15_775 - RNA polymerase sigma-70 RpoE type, at 785,551 to 786,294
_775
HP15_776: HP15_776 - sigma factor algU negative regulatory protein MucA, at 786,310 to 786,870
_776
Position (kb) 783
784
785
786 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 783.138 kb on + strand at 783.306 kb on + strand, within HP15_772 at 783.306 kb on + strand, within HP15_772 at 783.314 kb on - strand, within HP15_772 at 783.382 kb on + strand, within HP15_772 at 783.390 kb on - strand, within HP15_772 at 783.412 kb on - strand, within HP15_772 at 783.417 kb on - strand, within HP15_772 at 783.417 kb on - strand, within HP15_772 at 783.551 kb on - strand at 783.564 kb on + strand at 783.839 kb on - strand at 783.915 kb on - strand at 783.917 kb on - strand at 783.998 kb on - strand at 784.298 kb on + strand, within HP15_774 at 784.298 kb on + strand, within HP15_774 at 784.306 kb on - strand, within HP15_774 at 784.344 kb on + strand, within HP15_774 at 784.388 kb on - strand, within HP15_774 at 784.436 kb on + strand, within HP15_774 at 784.436 kb on + strand, within HP15_774 at 784.501 kb on - strand, within HP15_774 at 784.706 kb on - strand, within HP15_774 at 785.027 kb on - strand, within HP15_774 at 785.057 kb on + strand, within HP15_774 at 785.070 kb on - strand, within HP15_774 at 785.110 kb on + strand, within HP15_774 at 785.154 kb on + strand, within HP15_774 at 785.236 kb on - strand, within HP15_774 at 785.254 kb on - strand, within HP15_774 at 785.254 kb on - strand, within HP15_774 at 785.306 kb on + strand, within HP15_774 at 785.390 kb on - strand at 785.526 kb on - strand at 785.557 kb on - strand at 785.569 kb on + strand at 785.586 kb on - strand at 785.631 kb on + strand, within HP15_775 at 785.663 kb on + strand, within HP15_775 at 785.681 kb on - strand, within HP15_775 at 785.854 kb on + strand, within HP15_775 at 785.924 kb on + strand, within HP15_775 at 786.002 kb on - strand, within HP15_775 at 786.035 kb on + strand, within HP15_775 at 786.043 kb on - strand, within HP15_775 at 786.077 kb on + strand, within HP15_775 at 786.201 kb on - strand, within HP15_775 at 786.220 kb on - strand at 786.251 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 783,138 + -1.3 783,306 + HP15_772 0.42 -1.7 783,306 + HP15_772 0.42 -0.7 783,314 - HP15_772 0.44 -0.1 783,382 + HP15_772 0.59 +0.1 783,390 - HP15_772 0.60 +0.1 783,412 - HP15_772 0.65 -0.8 783,417 - HP15_772 0.66 -0.8 783,417 - HP15_772 0.66 +0.2 783,551 - -0.2 783,564 + -0.2 783,839 - -0.4 783,915 - -1.4 783,917 - -0.6 783,998 - -3.8 784,298 + HP15_774 0.26 -4.0 784,298 + HP15_774 0.26 -3.4 784,306 - HP15_774 0.27 -3.8 784,344 + HP15_774 0.29 -1.4 784,388 - HP15_774 0.32 -1.9 784,436 + HP15_774 0.35 -2.6 784,436 + HP15_774 0.35 -2.6 784,501 - HP15_774 0.39 -5.9 784,706 - HP15_774 0.51 -3.3 785,027 - HP15_774 0.71 -2.8 785,057 + HP15_774 0.73 -4.5 785,070 - HP15_774 0.74 -2.5 785,110 + HP15_774 0.76 -5.2 785,154 + HP15_774 0.79 -1.3 785,236 - HP15_774 0.84 -2.2 785,254 - HP15_774 0.85 -4.1 785,254 - HP15_774 0.85 -1.1 785,306 + HP15_774 0.88 -1.5 785,390 - -3.9 785,526 - -1.1 785,557 - +1.2 785,569 + +0.1 785,586 - -1.1 785,631 + HP15_775 0.11 +0.2 785,663 + HP15_775 0.15 +0.0 785,681 - HP15_775 0.17 -1.1 785,854 + HP15_775 0.41 -0.0 785,924 + HP15_775 0.50 -0.2 786,002 - HP15_775 0.61 +0.1 786,035 + HP15_775 0.65 -0.6 786,043 - HP15_775 0.66 -0.6 786,077 + HP15_775 0.71 -0.2 786,201 - HP15_775 0.87 +0.2 786,220 - -0.8 786,251 - -1.4
Or see this region's nucleotide sequence