Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_453 and HP15_454 are separated by 61 nucleotides HP15_454 and HP15_455 overlap by 1 nucleotides HP15_455 and HP15_456 are separated by 202 nucleotides
HP15_453: HP15_453 - thiamine biosynthesis protein thiC, at 457,555 to 459,450
_453
HP15_454: HP15_454 - nucleoside diphosphate pyrophosphatase, at 459,512 to 460,129
_454
HP15_455: HP15_455 - protein containing DUF1249, at 460,129 to 460,614
_455
HP15_456: HP15_456 - phosphohydrolase, at 460,817 to 461,623
_456
Position (kb) 460
461 Strain fitness (log2 ratio) -1
0
1 at 459.601 kb on - strand, within HP15_454 at 459.606 kb on - strand, within HP15_454 at 459.649 kb on - strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.681 kb on + strand, within HP15_454 at 459.711 kb on + strand, within HP15_454 at 459.714 kb on - strand, within HP15_454 at 459.719 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.751 kb on - strand, within HP15_454 at 459.802 kb on - strand, within HP15_454 at 459.855 kb on - strand, within HP15_454 at 459.933 kb on - strand, within HP15_454 at 459.991 kb on + strand, within HP15_454 at 460.084 kb on - strand at 460.086 kb on + strand at 460.179 kb on + strand, within HP15_455 at 460.187 kb on - strand, within HP15_455 at 460.637 kb on - strand at 460.701 kb on + strand at 460.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 459,601 - HP15_454 0.14 -0.2 459,606 - HP15_454 0.15 +1.0 459,649 - HP15_454 0.22 +0.1 459,678 + HP15_454 0.27 -0.7 459,678 + HP15_454 0.27 +0.2 459,681 + HP15_454 0.27 -0.1 459,711 + HP15_454 0.32 +1.5 459,714 - HP15_454 0.33 +0.3 459,719 - HP15_454 0.33 -0.2 459,738 - HP15_454 0.37 +0.2 459,738 - HP15_454 0.37 -0.4 459,751 - HP15_454 0.39 -0.1 459,802 - HP15_454 0.47 -0.1 459,855 - HP15_454 0.56 +0.4 459,933 - HP15_454 0.68 -0.2 459,991 + HP15_454 0.78 -0.1 460,084 - -1.0 460,086 + +0.0 460,179 + HP15_455 0.10 -1.4 460,187 - HP15_455 0.12 +0.8 460,637 - -0.0 460,701 + +0.2 460,710 - -0.3
Or see this region's nucleotide sequence