Strain Fitness in Marinobacter adhaerens HP15 around HP15_3519

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3518 and HP15_3519 overlap by 1 nucleotidesHP15_3519 and HP15_3520 are separated by 11 nucleotidesHP15_3520 and HP15_3521 are separated by 73 nucleotides HP15_3518: HP15_3518 - CheA signal transduction histidine kinase, at 3,700,534 to 3,708,128 _3518 HP15_3519: HP15_3519 - CheB methylesterase, at 3,708,128 to 3,709,180 _3519 HP15_3520: HP15_3520 - protein containing CheW-like domain, at 3,709,192 to 3,709,653 _3520 HP15_3521: HP15_3521 - zinc uptake regulation protein, at 3,709,727 to 3,710,218 _3521 Position (kb) 3708 3709 3710Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3707.448 kb on + strandat 3707.526 kb on - strandat 3707.528 kb on + strandat 3707.536 kb on - strandat 3707.536 kb on - strandat 3707.536 kb on - strandat 3707.597 kb on + strandat 3707.659 kb on + strandat 3707.738 kb on - strandat 3707.762 kb on - strandat 3707.833 kb on - strandat 3707.961 kb on - strandat 3708.034 kb on - strandat 3708.041 kb on + strandat 3708.049 kb on - strandat 3708.156 kb on - strandat 3708.221 kb on - strandat 3708.441 kb on + strand, within HP15_3519at 3708.470 kb on + strand, within HP15_3519at 3708.506 kb on - strand, within HP15_3519at 3708.563 kb on - strand, within HP15_3519at 3708.634 kb on - strand, within HP15_3519at 3708.788 kb on - strand, within HP15_3519at 3708.873 kb on + strand, within HP15_3519at 3708.918 kb on + strand, within HP15_3519at 3708.926 kb on - strand, within HP15_3519at 3709.022 kb on - strand, within HP15_3519at 3709.203 kb on + strandat 3709.257 kb on + strand, within HP15_3520at 3709.499 kb on + strand, within HP15_3520at 3709.932 kb on - strand, within HP15_3521at 3710.097 kb on + strand, within HP15_3521at 3710.097 kb on + strand, within HP15_3521at 3710.105 kb on - strand, within HP15_3521at 3710.105 kb on - strand, within HP15_3521at 3710.109 kb on + strand, within HP15_3521

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml
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3,707,448 + +0.6
3,707,526 - +0.4
3,707,528 + +0.4
3,707,536 - +0.2
3,707,536 - +0.3
3,707,536 - -0.3
3,707,597 + +0.7
3,707,659 + -0.5
3,707,738 - -1.1
3,707,762 - -0.5
3,707,833 - +0.3
3,707,961 - -0.0
3,708,034 - +0.8
3,708,041 + +0.7
3,708,049 - -1.2
3,708,156 - -0.1
3,708,221 - -0.6
3,708,441 + HP15_3519 0.30 -1.8
3,708,470 + HP15_3519 0.32 -1.3
3,708,506 - HP15_3519 0.36 -0.3
3,708,563 - HP15_3519 0.41 +0.7
3,708,634 - HP15_3519 0.48 -2.5
3,708,788 - HP15_3519 0.63 -1.5
3,708,873 + HP15_3519 0.71 -0.6
3,708,918 + HP15_3519 0.75 -0.3
3,708,926 - HP15_3519 0.76 -0.7
3,709,022 - HP15_3519 0.85 +0.0
3,709,203 + -0.1
3,709,257 + HP15_3520 0.14 -0.5
3,709,499 + HP15_3520 0.66 +0.5
3,709,932 - HP15_3521 0.42 -1.7
3,710,097 + HP15_3521 0.75 -3.9
3,710,097 + HP15_3521 0.75 -2.3
3,710,105 - HP15_3521 0.77 -4.3
3,710,105 - HP15_3521 0.77 -4.6
3,710,109 + HP15_3521 0.78 -5.2

Or see this region's nucleotide sequence