Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34250

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,589,154	-		PGA1_c34240	0.49	+1.1
3,589,164	-		PGA1_c34240	0.50	+1.3
3,589,214	-		PGA1_c34240	0.52	+0.1
3,589,274	+		PGA1_c34240	0.56	-0.6
3,589,275	+		PGA1_c34240	0.56	-0.2
3,589,283	-		PGA1_c34240	0.56	+0.3
3,589,310	+		PGA1_c34240	0.58	-1.2
3,589,310	+		PGA1_c34240	0.58	+1.2
3,589,310	+		PGA1_c34240	0.58	-2.5
3,589,310	+		PGA1_c34240	0.58	+0.5
3,589,399	+		PGA1_c34240	0.62	+0.2
3,589,399	+		PGA1_c34240	0.62	+0.2
3,589,399	+		PGA1_c34240	0.62	-1.0
3,589,399	+		PGA1_c34240	0.62	+0.4
3,589,407	-		PGA1_c34240	0.63	-1.8
3,589,407	-		PGA1_c34240	0.63	-0.5
3,589,407	-		PGA1_c34240	0.63	-0.6
3,589,407	-		PGA1_c34240	0.63	-0.9
3,589,407	-		PGA1_c34240	0.63	-0.9
3,589,454	+		PGA1_c34240	0.65	+0.1
3,589,542	-		PGA1_c34240	0.70	-0.7
3,589,581	+		PGA1_c34240	0.72	-0.3
3,589,581	+		PGA1_c34240	0.72	-2.7
3,589,637	-		PGA1_c34240	0.76	+0.2
3,589,668	-		PGA1_c34240	0.77	-0.3
3,589,728	-		PGA1_c34240	0.81	-0.0
3,589,852	-		PGA1_c34240	0.87	+1.4
3,589,872	-		PGA1_c34240	0.88	-1.0
3,590,022	-				+0.3
3,590,039	+				+1.4
3,590,047	-				-1.8
3,590,086	-				-1.4
3,590,105	+				+0.4
3,590,105	+				+0.4
3,590,129	+				-0.8
3,590,152	+				+0.1
3,590,157	-				-0.2
3,590,184	-				-0.1
3,590,231	+				+0.4
3,590,262	+				-0.3
3,590,262	-				-0.5
3,590,297	+				-0.4
3,590,297	+				+0.9
3,590,302	+		PGA1_c34250	0.10	-0.6
3,590,309	+		PGA1_c34250	0.11	+0.4
3,590,335	+		PGA1_c34250	0.12	+0.8
3,590,375	-		PGA1_c34250	0.15	+0.3
3,590,375	-		PGA1_c34250	0.15	-0.4
3,590,375	-		PGA1_c34250	0.15	+0.0
3,590,377	+		PGA1_c34250	0.15	-0.9
3,590,385	-		PGA1_c34250	0.16	+1.1
3,590,405	-		PGA1_c34250	0.17	-1.1
3,590,407	-		PGA1_c34250	0.17	+0.3
3,590,507	+		PGA1_c34250	0.24	+0.5
3,590,507	+		PGA1_c34250	0.24	+0.5
3,590,514	-		PGA1_c34250	0.24	-0.2
3,590,515	-		PGA1_c34250	0.24	-1.9
3,590,526	+		PGA1_c34250	0.25	-0.1
3,590,532	+		PGA1_c34250	0.26	+1.6
3,590,540	-		PGA1_c34250	0.26	-0.3
3,590,565	+		PGA1_c34250	0.28	-0.7
3,590,565	+		PGA1_c34250	0.28	+0.5
3,590,619	+		PGA1_c34250	0.31	+0.3
3,590,707	+		PGA1_c34250	0.37	+0.2
3,590,707	+		PGA1_c34250	0.37	-0.8
3,590,715	-		PGA1_c34250	0.38	+0.6
3,590,809	+		PGA1_c34250	0.44	-0.1
3,590,831	+		PGA1_c34250	0.46	-0.3
3,590,831	+		PGA1_c34250	0.46	+0.9
3,590,831	+		PGA1_c34250	0.46	+0.4
3,590,831	+		PGA1_c34250	0.46	-0.0
3,590,831	+		PGA1_c34250	0.46	-0.8
3,590,831	+		PGA1_c34250	0.46	+0.7
3,590,831	+		PGA1_c34250	0.46	+0.4
3,590,831	+		PGA1_c34250	0.46	-1.1
3,590,839	-		PGA1_c34250	0.46	+0.4
3,590,839	-		PGA1_c34250	0.46	+0.5
3,590,839	-		PGA1_c34250	0.46	-2.0
3,590,839	-		PGA1_c34250	0.46	+0.1
3,590,839	-		PGA1_c34250	0.46	+0.8
3,590,839	-		PGA1_c34250	0.46	+0.5
3,590,839	-		PGA1_c34250	0.46	+1.3
3,590,839	-		PGA1_c34250	0.46	-0.5
3,590,839	-		PGA1_c34250	0.46	+0.6
3,590,839	-		PGA1_c34250	0.46	-1.7
3,590,839	-		PGA1_c34250	0.46	-0.2
3,590,839	-		PGA1_c34250	0.46	-0.9
3,590,839	-		PGA1_c34250	0.46	-0.2
3,590,988	+		PGA1_c34250	0.56	+0.5
3,590,996	-		PGA1_c34250	0.57	-0.1
3,591,009	+		PGA1_c34250	0.58	-0.2
3,591,053	+		PGA1_c34250	0.61	-0.8
3,591,090	+		PGA1_c34250	0.63	+0.4
3,591,090	+		PGA1_c34250	0.63	+0.0
3,591,090	+		PGA1_c34250	0.63	+0.1
3,591,098	-		PGA1_c34250	0.64	+1.5
3,591,100	+		PGA1_c34250	0.64	-0.1
3,591,116	-		PGA1_c34250	0.65	+0.4
3,591,226	+		PGA1_c34250	0.72	-0.3
3,591,326	-		PGA1_c34250	0.79	+0.4
3,591,344	-		PGA1_c34250	0.80	-0.1
3,591,377	+		PGA1_c34250	0.83	+0.4
3,591,391	-		PGA1_c34250	0.84	-0.5
3,591,391	-		PGA1_c34250	0.84	-0.9
3,591,543	+				-0.6
3,591,543	+				+0.7
3,591,543	+				-0.8
3,591,594	+				-0.3
3,591,594	+				-1.2
3,591,594	+				+0.3
3,591,594	+				-0.6
3,591,594	+				-1.1
3,591,594	+				-0.6
3,591,594	+				+0.3
3,591,609	+				-1.6
3,591,757	+				-0.2
3,591,757	+				-0.5
3,591,757	+				-0.2
3,591,765	-				-0.4
3,591,765	-				+0.2
3,591,804	-				-0.4
3,592,064	+				+0.7
3,592,072	-				-2.2
3,592,072	-				-0.5
3,592,075	+				-0.3
3,592,084	-				+0.6
3,592,142	-				-0.8
3,592,144	+				-1.8
3,592,152	-				+0.5
3,592,304	-				+0.2
3,592,308	+				+0.3
3,592,308	+				-0.1
3,592,308	+				-1.8
3,592,316	-				-0.1
3,592,316	-				-0.7
3,592,322	-				-0.6
3,592,334	-				+1.2
3,592,334	-				-0.6
3,592,351	-				-0.7
3,592,429	+		PGA1_c34270	0.18	+0.5
3,592,433	-		PGA1_c34270	0.18	-1.4
3,592,434	+		PGA1_c34270	0.18	-0.8
3,592,434	+		PGA1_c34270	0.18	+0.4
3,592,437	-		PGA1_c34270	0.19	+0.8
3,592,437	-		PGA1_c34270	0.19	+0.2
3,592,442	-		PGA1_c34270	0.19	-2.8
3,592,447	-		PGA1_c34270	0.20	-0.7
3,592,577	+		PGA1_c34270	0.34	+0.1
3,592,584	-		PGA1_c34270	0.35	+0.5
3,592,607	+		PGA1_c34270	0.38	+0.3