Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33070

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,464,501	-		PGA1_c33050	0.89	+0.8
3,464,534	+				+0.3
3,464,608	+				-0.1
3,464,656	+		PGA1_c33055	0.21	+0.5
3,464,668	+		PGA1_c33055	0.25	+0.7
3,464,702	+		PGA1_c33055	0.39	-0.7
3,464,703	+		PGA1_c33055	0.39	+0.1
3,464,703	+		PGA1_c33055	0.39	+0.5
3,464,709	+		PGA1_c33055	0.42	-1.1
3,464,710	-		PGA1_c33055	0.42	+0.8
3,464,741	-		PGA1_c33055	0.54	-1.0
3,464,777	+		PGA1_c33055	0.69	+1.3
3,464,782	+		PGA1_c33055	0.71	-1.5
3,464,806	+		PGA1_c33055	0.80	+0.0
3,464,814	-		PGA1_c33055	0.83	-0.0
3,464,837	-				+0.2
3,464,842	+				-0.5
3,464,842	+				+0.3
3,464,863	-				+0.1
3,464,865	+				-0.5
3,464,896	+				+0.7
3,464,896	+				+0.8
3,464,896	+				-0.9
3,464,904	-				-0.1
3,464,904	-				-1.5
3,464,914	-				+0.6
3,464,923	-				+0.0
3,464,929	-				+0.3
3,464,953	+				+0.6
3,464,962	+				-0.8
3,464,963	-				-2.1
3,464,970	-		PGA1_c33060	0.11	-0.3
3,465,041	+		PGA1_c33060	0.25	+1.8
3,465,049	-		PGA1_c33060	0.27	-0.3
3,465,049	-		PGA1_c33060	0.27	-0.3
3,465,049	-		PGA1_c33060	0.27	+0.3
3,465,053	+		PGA1_c33060	0.28	+0.1
3,465,134	+		PGA1_c33060	0.44	-0.3
3,465,134	+		PGA1_c33060	0.44	+0.1
3,465,142	-		PGA1_c33060	0.45	+0.5
3,465,147	+		PGA1_c33060	0.46	-0.1
3,465,181	-		PGA1_c33060	0.53	-0.1
3,465,188	-		PGA1_c33060	0.54	+0.5
3,465,213	+		PGA1_c33060	0.59	-0.4
3,465,276	+		PGA1_c33060	0.72	-1.0
3,465,407	-				-0.7
3,465,417	+				-1.9
3,465,422	+				+0.1
3,465,432	+				-0.5
3,465,518	-				-1.0
3,465,869	+		PGA1_c33070	0.44	-1.7
3,465,925	-		PGA1_c33070	0.51	-1.0
3,465,926	+		PGA1_c33070	0.51	-0.5
3,466,114	-		PGA1_c33070	0.73	-0.4
3,466,221	+		PGA1_c33070	0.85	-2.5
3,466,226	-		PGA1_c33070	0.86	-2.8
3,466,241	-		PGA1_c33070	0.88	-2.0
3,466,364	-				+0.7
3,466,364	-				+0.5
3,466,408	+				+0.8
3,466,470	+		PGA1_c33080	0.17	-0.0
3,466,473	-		PGA1_c33080	0.18	+0.5
3,466,473	-		PGA1_c33080	0.18	+0.6
3,466,473	-		PGA1_c33080	0.18	+0.8
3,466,564	+		PGA1_c33080	0.31	-1.5
3,466,602	+		PGA1_c33080	0.37	+1.6
3,466,675	+		PGA1_c33080	0.48	-0.1
3,466,683	-		PGA1_c33080	0.50	+0.3
3,466,756	+		PGA1_c33080	0.61	-0.7
3,466,764	-		PGA1_c33080	0.62	+0.6
3,466,783	+		PGA1_c33080	0.65	+0.5
3,466,804	+		PGA1_c33080	0.68	+0.5
3,466,806	-		PGA1_c33080	0.69	-0.6
3,466,812	-		PGA1_c33080	0.69	+1.1
3,466,812	-		PGA1_c33080	0.69	-0.2
3,466,876	-		PGA1_c33080	0.79	+0.5
3,466,891	+		PGA1_c33080	0.81	-0.0
3,466,913	+		PGA1_c33080	0.85	-0.0
3,466,918	+		PGA1_c33080	0.86	+0.7
3,466,918	+		PGA1_c33080	0.86	-0.3
3,466,918	+		PGA1_c33080	0.86	-0.7
3,466,938	+		PGA1_c33080	0.89	+0.3
3,466,967	+				+0.1
3,467,002	+				+1.4
3,467,012	+				+0.3
3,467,025	-				-1.0
3,467,088	+				-0.2
3,467,091	+				-0.1
3,467,110	+				+0.2
3,467,146	+				-0.2
3,467,146	+				+0.3
3,467,180	-				+1.2
3,467,180	-				-0.7
3,467,195	+		PGA1_c33090	0.11	-0.6
3,467,195	+		PGA1_c33090	0.11	-0.2
3,467,209	+		PGA1_c33090	0.14	+1.3
3,467,263	+		PGA1_c33090	0.27	+0.6
3,467,263	+		PGA1_c33090	0.27	+0.4
3,467,271	-		PGA1_c33090	0.29	+0.1
3,467,271	-		PGA1_c33090	0.29	-1.4