Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2896 and HP15_2897 are separated by 103 nucleotides HP15_2897 and HP15_2898 overlap by 4 nucleotides HP15_2898 and HP15_2899 are separated by 21 nucleotides
HP15_2896: HP15_2896 - glycosyltransferase, at 3,031,540 to 3,033,783
_2896
HP15_2897: HP15_2897 - uncharacterized conserved protein UCP037004, at 3,033,887 to 3,034,834
_2897
HP15_2898: HP15_2898 - secreted protein containing DUF481, at 3,034,831 to 3,035,562
_2898
HP15_2899: HP15_2899 - rhodanese sulfurtransferase, at 3,035,584 to 3,036,606
_2899
Position (kb)
3033
3034
3035 Strain fitness (log2 ratio)
-1
0
1
2 at 3032.916 kb on - strand, within HP15_2896 at 3032.943 kb on - strand, within HP15_2896 at 3033.005 kb on + strand, within HP15_2896 at 3033.092 kb on + strand, within HP15_2896 at 3033.151 kb on + strand, within HP15_2896 at 3033.151 kb on + strand, within HP15_2896 at 3033.444 kb on - strand, within HP15_2896 at 3033.686 kb on + strand at 3033.686 kb on + strand at 3033.701 kb on + strand at 3033.718 kb on + strand at 3033.725 kb on + strand at 3034.074 kb on + strand, within HP15_2897 at 3034.096 kb on + strand, within HP15_2897 at 3034.117 kb on + strand at 3034.127 kb on + strand, within HP15_2897 at 3034.147 kb on + strand, within HP15_2897 at 3034.184 kb on - strand, within HP15_2897 at 3034.296 kb on - strand, within HP15_2897 at 3034.296 kb on - strand, within HP15_2897 at 3034.441 kb on - strand, within HP15_2897 at 3034.503 kb on - strand, within HP15_2897 at 3034.514 kb on + strand, within HP15_2897 at 3034.599 kb on + strand, within HP15_2897 at 3034.643 kb on - strand, within HP15_2897 at 3034.670 kb on + strand, within HP15_2897 at 3034.838 kb on + strand at 3034.909 kb on + strand, within HP15_2898 at 3034.972 kb on - strand, within HP15_2898 at 3035.103 kb on - strand, within HP15_2898 at 3035.404 kb on + strand, within HP15_2898 at 3035.551 kb on + strand at 3035.582 kb on + strand at 3035.600 kb on + strand at 3035.637 kb on + strand at 3035.814 kb on + strand, within HP15_2899
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 3,032,916 - HP15_2896 0.61 -0.0 3,032,943 - HP15_2896 0.63 -0.3 3,033,005 + HP15_2896 0.65 +2.3 3,033,092 + HP15_2896 0.69 -0.4 3,033,151 + HP15_2896 0.72 -0.2 3,033,151 + HP15_2896 0.72 +0.0 3,033,444 - HP15_2896 0.85 -0.2 3,033,686 + +0.5 3,033,686 + -0.9 3,033,701 + -0.4 3,033,718 + -0.1 3,033,725 + -0.7 3,034,074 + HP15_2897 0.20 +0.1 3,034,096 + HP15_2897 0.22 +0.9 3,034,117 + +2.2 3,034,127 + HP15_2897 0.25 +0.2 3,034,147 + HP15_2897 0.27 -0.6 3,034,184 - HP15_2897 0.31 -0.2 3,034,296 - HP15_2897 0.43 -0.2 3,034,296 - HP15_2897 0.43 -0.4 3,034,441 - HP15_2897 0.58 -1.3 3,034,503 - HP15_2897 0.65 -0.2 3,034,514 + HP15_2897 0.66 +0.2 3,034,599 + HP15_2897 0.75 -1.7 3,034,643 - HP15_2897 0.80 -0.1 3,034,670 + HP15_2897 0.83 -0.6 3,034,838 + +0.3 3,034,909 + HP15_2898 0.11 +0.5 3,034,972 - HP15_2898 0.19 -0.2 3,035,103 - HP15_2898 0.37 -0.2 3,035,404 + HP15_2898 0.78 -0.8 3,035,551 + +0.1 3,035,582 + +0.2 3,035,600 + -1.0 3,035,637 + -0.1 3,035,814 + HP15_2899 0.22 -0.1
Or see this region's nucleotide sequence