Strain Fitness in Marinobacter adhaerens HP15 around HP15_2897

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2896 and HP15_2897 are separated by 103 nucleotidesHP15_2897 and HP15_2898 overlap by 4 nucleotidesHP15_2898 and HP15_2899 are separated by 21 nucleotides HP15_2896: HP15_2896 - glycosyltransferase, at 3,031,540 to 3,033,783 _2896 HP15_2897: HP15_2897 - uncharacterized conserved protein UCP037004, at 3,033,887 to 3,034,834 _2897 HP15_2898: HP15_2898 - secreted protein containing DUF481, at 3,034,831 to 3,035,562 _2898 HP15_2899: HP15_2899 - rhodanese sulfurtransferase, at 3,035,584 to 3,036,606 _2899 Position (kb) 3033 3034 3035Strain fitness (log2 ratio) -1 0 1 2at 3032.916 kb on - strand, within HP15_2896at 3032.943 kb on - strand, within HP15_2896at 3033.005 kb on + strand, within HP15_2896at 3033.092 kb on + strand, within HP15_2896at 3033.151 kb on + strand, within HP15_2896at 3033.151 kb on + strand, within HP15_2896at 3033.444 kb on - strand, within HP15_2896at 3033.686 kb on + strandat 3033.686 kb on + strandat 3033.701 kb on + strandat 3033.718 kb on + strandat 3033.725 kb on + strandat 3034.074 kb on + strand, within HP15_2897at 3034.096 kb on + strand, within HP15_2897at 3034.117 kb on + strandat 3034.127 kb on + strand, within HP15_2897at 3034.147 kb on + strand, within HP15_2897at 3034.184 kb on - strand, within HP15_2897at 3034.296 kb on - strand, within HP15_2897at 3034.296 kb on - strand, within HP15_2897at 3034.441 kb on - strand, within HP15_2897at 3034.503 kb on - strand, within HP15_2897at 3034.514 kb on + strand, within HP15_2897at 3034.599 kb on + strand, within HP15_2897at 3034.643 kb on - strand, within HP15_2897at 3034.670 kb on + strand, within HP15_2897at 3034.838 kb on + strandat 3034.909 kb on + strand, within HP15_2898at 3034.972 kb on - strand, within HP15_2898at 3035.103 kb on - strand, within HP15_2898at 3035.404 kb on + strand, within HP15_2898at 3035.551 kb on + strandat 3035.582 kb on + strandat 3035.600 kb on + strandat 3035.637 kb on + strandat 3035.814 kb on + strand, within HP15_2899

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml
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3,032,916 - HP15_2896 0.61 -0.0
3,032,943 - HP15_2896 0.63 -0.3
3,033,005 + HP15_2896 0.65 +2.3
3,033,092 + HP15_2896 0.69 -0.4
3,033,151 + HP15_2896 0.72 -0.2
3,033,151 + HP15_2896 0.72 +0.0
3,033,444 - HP15_2896 0.85 -0.2
3,033,686 + +0.5
3,033,686 + -0.9
3,033,701 + -0.4
3,033,718 + -0.1
3,033,725 + -0.7
3,034,074 + HP15_2897 0.20 +0.1
3,034,096 + HP15_2897 0.22 +0.9
3,034,117 + +2.2
3,034,127 + HP15_2897 0.25 +0.2
3,034,147 + HP15_2897 0.27 -0.6
3,034,184 - HP15_2897 0.31 -0.2
3,034,296 - HP15_2897 0.43 -0.2
3,034,296 - HP15_2897 0.43 -0.4
3,034,441 - HP15_2897 0.58 -1.3
3,034,503 - HP15_2897 0.65 -0.2
3,034,514 + HP15_2897 0.66 +0.2
3,034,599 + HP15_2897 0.75 -1.7
3,034,643 - HP15_2897 0.80 -0.1
3,034,670 + HP15_2897 0.83 -0.6
3,034,838 + +0.3
3,034,909 + HP15_2898 0.11 +0.5
3,034,972 - HP15_2898 0.19 -0.2
3,035,103 - HP15_2898 0.37 -0.2
3,035,404 + HP15_2898 0.78 -0.8
3,035,551 + +0.1
3,035,582 + +0.2
3,035,600 + -1.0
3,035,637 + -0.1
3,035,814 + HP15_2899 0.22 -0.1

Or see this region's nucleotide sequence