Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29500

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,083,834	+		PGA1_c29490	0.55	+0.3
3,083,834	+		PGA1_c29490	0.55	-1.4
3,083,834	+		PGA1_c29490	0.55	+0.3
3,083,834	+		PGA1_c29490	0.55	+0.0
3,083,834	+		PGA1_c29490	0.55	+1.0
3,083,844	+		PGA1_c29490	0.56	-0.5
3,083,866	+		PGA1_c29490	0.57	+1.1
3,083,953	+		PGA1_c29490	0.61	-1.5
3,083,953	+		PGA1_c29490	0.61	+0.3
3,083,982	+		PGA1_c29490	0.63	+0.5
3,084,184	-		PGA1_c29490	0.74	+0.7
3,084,210	+		PGA1_c29490	0.75	+1.2
3,084,236	-		PGA1_c29490	0.77	-0.6
3,084,343	-		PGA1_c29490	0.83	+0.4
3,084,343	-		PGA1_c29490	0.83	+1.8
3,084,350	+		PGA1_c29490	0.83	-0.1
3,084,432	+		PGA1_c29490	0.87	-0.2
3,084,443	+		PGA1_c29490	0.88	-0.1
3,084,580	+				-1.4
3,084,657	-				-0.4
3,084,671	+				+0.4
3,084,704	-				+0.2
3,084,749	-				+0.2
3,084,764	+				+0.2
3,084,764	+				+1.6
3,084,772	-				-0.3
3,084,822	+		PGA1_c29500	0.11	-0.5
3,084,830	-		PGA1_c29500	0.12	-2.0
3,084,876	+		PGA1_c29500	0.22	+0.8
3,084,884	-		PGA1_c29500	0.24	-0.7
3,084,884	-		PGA1_c29500	0.24	-1.9
3,084,884	-		PGA1_c29500	0.24	-0.4
3,084,884	-		PGA1_c29500	0.24	-2.0
3,084,884	-		PGA1_c29500	0.24	-0.0
3,084,905	+		PGA1_c29500	0.28	-0.8
3,085,024	+		PGA1_c29500	0.54	-0.9
3,085,059	+		PGA1_c29500	0.61	-0.3
3,085,067	-		PGA1_c29500	0.63	-0.2
3,085,143	+		PGA1_c29500	0.79	-0.7
3,085,166	-		PGA1_c29500	0.84	+0.6
3,085,242	+				-0.6
3,085,248	+				+0.4
3,085,248	+				+0.5
3,085,256	-				+1.6
3,085,340	-				-0.8
3,085,343	+				-0.7
3,085,361	+				+0.3
3,085,369	-				-1.3
3,085,369	-				-0.3
3,085,369	-				-0.3
3,085,369	-				-0.1
3,085,369	-				-0.3
3,085,395	+				+0.1
3,085,398	-				-0.6
3,085,486	+		PGA1_c29510	0.14	+0.8
3,085,503	-		PGA1_c29510	0.16	+0.0
3,085,526	+		PGA1_c29510	0.19	+0.5
3,085,526	+		PGA1_c29510	0.19	+1.0
3,085,534	-		PGA1_c29510	0.20	+0.1
3,085,536	+		PGA1_c29510	0.20	+0.5
3,085,536	+		PGA1_c29510	0.20	+0.1
3,085,543	+		PGA1_c29510	0.21	-0.9
3,085,591	-		PGA1_c29510	0.27	-0.4
3,085,632	-		PGA1_c29510	0.32	+0.9
3,085,636	+		PGA1_c29510	0.33	-0.1
3,085,644	-		PGA1_c29510	0.34	+1.6
3,085,701	+		PGA1_c29510	0.41	-0.5
3,085,709	-		PGA1_c29510	0.42	+0.1
3,085,720	+		PGA1_c29510	0.43	-2.6
3,085,728	-		PGA1_c29510	0.44	-0.4
3,085,790	+		PGA1_c29510	0.51	-0.1
3,085,790	+		PGA1_c29510	0.51	-0.0
3,085,790	+		PGA1_c29510	0.51	+0.2
3,085,790	+		PGA1_c29510	0.51	-0.2
3,085,790	+		PGA1_c29510	0.51	-0.1
3,085,798	-		PGA1_c29510	0.52	+0.3
3,085,798	-		PGA1_c29510	0.52	+0.1
3,085,798	-		PGA1_c29510	0.52	+0.0
3,085,798	-		PGA1_c29510	0.52	+0.6
3,085,798	-		PGA1_c29510	0.52	-0.5
3,085,798	-		PGA1_c29510	0.52	+1.7
3,085,798	-		PGA1_c29510	0.52	-0.0
3,085,826	-		PGA1_c29510	0.56	+0.1
3,085,830	-		PGA1_c29510	0.56	-0.3
3,085,833	+		PGA1_c29510	0.57	-0.1
3,085,841	-		PGA1_c29510	0.58	+0.5
3,085,841	-		PGA1_c29510	0.58	+0.3
3,085,841	-		PGA1_c29510	0.58	-0.9
3,085,841	-		PGA1_c29510	0.58	+0.4
3,085,841	-		PGA1_c29510	0.58	+0.2
3,085,841	-		PGA1_c29510	0.58	+0.8
3,085,841	-		PGA1_c29510	0.58	+0.8
3,085,841	-		PGA1_c29510	0.58	+0.1
3,085,854	-		PGA1_c29510	0.59	+0.4
3,085,868	+		PGA1_c29510	0.61	+0.5
3,085,904	+		PGA1_c29510	0.65	-0.1
3,085,904	+		PGA1_c29510	0.65	-0.5
3,085,917	-		PGA1_c29510	0.67	-0.4
3,085,933	-		PGA1_c29510	0.69	-0.2
3,085,939	+		PGA1_c29510	0.70	+0.3
3,085,960	+		PGA1_c29510	0.72	-0.9
3,085,960	+		PGA1_c29510	0.72	+0.2
3,085,997	-		PGA1_c29510	0.77	+0.8
3,086,022	+		PGA1_c29510	0.80	-1.4
3,086,027	+		PGA1_c29510	0.80	+1.0
3,086,035	-		PGA1_c29510	0.81	+0.1
3,086,074	-		PGA1_c29510	0.86	-0.3
3,086,123	+				+0.0
3,086,123	+				+0.7
3,086,131	-				+0.8
3,086,133	+				-0.2
3,086,133	+				-0.7
3,086,160	+				-1.3
3,086,168	-				-0.7
3,086,171	-				-0.3
3,086,188	-				+0.4
3,086,196	+				+0.2
3,086,196	+				-0.5
3,086,199	-				+0.4
3,086,204	-				-0.3
3,086,204	-				-0.5
3,086,204	-				-0.1
3,086,228	+				+0.3
3,086,228	+				-1.0
3,086,228	+				-0.4
3,086,229	-				+0.3
3,086,233	+				+0.2
3,086,233	+				-0.2
3,086,233	+				-0.1
3,086,233	+				-0.7
3,086,233	+				-0.4
3,086,233	+				-0.9
3,086,233	+				+0.2
3,086,233	+				+0.7
3,086,233	+				+0.5
3,086,233	+				+1.4
3,086,233	+				-0.5
3,086,233	+				-0.8
3,086,236	-				-0.4
3,086,236	-				-0.2
3,086,239	-				+0.2
3,086,239	-				+0.5