Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_277 and HP15_278 are separated by 72 nucleotides HP15_278 and HP15_279 are separated by 17 nucleotides HP15_279 and HP15_280 are separated by 17 nucleotides
HP15_277: HP15_277 - Mg-chelatase subunits D/I family, ComM subfamily protein, at 268,375 to 269,949
_277
HP15_278: HP15_278 - tRNA (guanine-N(7)-)-methyltransferase, at 270,022 to 270,753
_278
HP15_279: HP15_279 - conserved hypothetical protein, membrane, at 270,771 to 271,286
_279
HP15_280: HP15_280 - putative oxygen-independent coproporphyrinogen III oxidase, at 271,304 to 272,386
_280
Position (kb) 270
271 Strain fitness (log2 ratio) -2
-1
0
1
2 at 269.038 kb on - strand, within HP15_277 at 269.097 kb on - strand, within HP15_277 at 269.098 kb on + strand, within HP15_277 at 269.136 kb on + strand, within HP15_277 at 269.310 kb on - strand, within HP15_277 at 269.487 kb on + strand, within HP15_277 at 269.544 kb on + strand, within HP15_277 at 269.564 kb on + strand, within HP15_277 at 269.576 kb on + strand, within HP15_277 at 269.577 kb on - strand, within HP15_277 at 269.590 kb on + strand, within HP15_277 at 269.620 kb on + strand, within HP15_277 at 269.647 kb on + strand, within HP15_277 at 269.647 kb on + strand, within HP15_277 at 269.705 kb on - strand, within HP15_277 at 269.786 kb on + strand, within HP15_277 at 269.938 kb on - strand at 269.970 kb on - strand at 270.091 kb on + strand at 270.098 kb on + strand, within HP15_278 at 270.264 kb on - strand, within HP15_278 at 270.324 kb on + strand, within HP15_278 at 270.342 kb on + strand, within HP15_278 at 270.397 kb on - strand, within HP15_278 at 270.458 kb on + strand, within HP15_278 at 270.520 kb on - strand, within HP15_278 at 270.536 kb on + strand, within HP15_278 at 270.537 kb on + strand, within HP15_278 at 270.770 kb on - strand at 270.775 kb on - strand at 270.855 kb on - strand, within HP15_279 at 270.866 kb on + strand, within HP15_279 at 270.876 kb on - strand, within HP15_279 at 270.878 kb on + strand, within HP15_279 at 270.926 kb on + strand, within HP15_279 at 270.934 kb on + strand, within HP15_279 at 270.965 kb on + strand, within HP15_279 at 271.150 kb on + strand, within HP15_279 at 271.184 kb on - strand, within HP15_279 at 271.184 kb on - strand, within HP15_279 at 271.221 kb on - strand, within HP15_279 at 271.435 kb on - strand, within HP15_280 at 271.536 kb on - strand, within HP15_280 at 271.536 kb on - strand, within HP15_280
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 269,038 - HP15_277 0.42 +0.2 269,097 - HP15_277 0.46 +0.1 269,098 + HP15_277 0.46 -0.4 269,136 + HP15_277 0.48 -0.5 269,310 - HP15_277 0.59 -0.1 269,487 + HP15_277 0.71 +0.9 269,544 + HP15_277 0.74 -0.1 269,564 + HP15_277 0.75 -1.1 269,576 + HP15_277 0.76 -0.0 269,577 - HP15_277 0.76 +0.0 269,590 + HP15_277 0.77 +0.5 269,620 + HP15_277 0.79 -0.0 269,647 + HP15_277 0.81 +0.1 269,647 + HP15_277 0.81 +0.2 269,705 - HP15_277 0.84 -0.5 269,786 + HP15_277 0.90 +2.6 269,938 - +0.1 269,970 - +0.0 270,091 + -0.1 270,098 + HP15_278 0.10 -0.3 270,264 - HP15_278 0.33 -0.6 270,324 + HP15_278 0.41 -0.3 270,342 + HP15_278 0.44 -0.5 270,397 - HP15_278 0.51 -1.2 270,458 + HP15_278 0.60 -0.1 270,520 - HP15_278 0.68 -0.3 270,536 + HP15_278 0.70 -1.9 270,537 + HP15_278 0.70 -0.4 270,770 - -0.3 270,775 - -0.0 270,855 - HP15_279 0.16 -0.3 270,866 + HP15_279 0.18 -0.0 270,876 - HP15_279 0.20 -0.2 270,878 + HP15_279 0.21 +0.0 270,926 + HP15_279 0.30 +0.1 270,934 + HP15_279 0.32 +0.3 270,965 + HP15_279 0.38 +0.1 271,150 + HP15_279 0.73 -0.0 271,184 - HP15_279 0.80 +1.9 271,184 - HP15_279 0.80 +0.1 271,221 - HP15_279 0.87 +0.4 271,435 - HP15_280 0.12 +0.1 271,536 - HP15_280 0.21 +1.3 271,536 - HP15_280 0.21 -0.2
Or see this region's nucleotide sequence