Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2434 and HP15_2435 are separated by 34 nucleotides HP15_2435 and HP15_2436 overlap by 4 nucleotides HP15_2436 and HP15_2437 are separated by 188 nucleotides
HP15_2434: HP15_2434 - mammalian cell entry related domain protein, at 2,574,104 to 2,574,553
_2434
HP15_2435: HP15_2435 - ABC-type transport system involved in resistance to organic solvents, permease component, at 2,574,588 to 2,575,370
_2435
HP15_2436: HP15_2436 - toluene tolerance ABC efflux transporter, ATP-binding protein, at 2,575,367 to 2,576,179
_2436
HP15_2437: HP15_2437 - KpsF/GutQ family protein, at 2,576,368 to 2,577,347
_2437
Position (kb)
2575
2576
2577 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2574.369 kb on - strand, within HP15_2434 at 2574.369 kb on - strand, within HP15_2434 at 2574.560 kb on - strand at 2574.617 kb on + strand at 2574.705 kb on + strand, within HP15_2435 at 2574.713 kb on - strand, within HP15_2435 at 2574.732 kb on + strand, within HP15_2435 at 2574.771 kb on + strand, within HP15_2435 at 2574.803 kb on + strand, within HP15_2435 at 2574.836 kb on + strand, within HP15_2435 at 2574.853 kb on + strand, within HP15_2435 at 2575.104 kb on + strand, within HP15_2435 at 2575.137 kb on + strand, within HP15_2435 at 2575.142 kb on + strand, within HP15_2435 at 2575.155 kb on - strand, within HP15_2435 at 2575.161 kb on + strand, within HP15_2435 at 2575.225 kb on + strand, within HP15_2435 at 2575.233 kb on - strand, within HP15_2435 at 2575.233 kb on - strand, within HP15_2435 at 2575.360 kb on - strand at 2575.377 kb on + strand at 2575.495 kb on + strand, within HP15_2436 at 2575.500 kb on + strand, within HP15_2436 at 2575.503 kb on - strand, within HP15_2436 at 2575.603 kb on - strand, within HP15_2436 at 2575.613 kb on + strand, within HP15_2436 at 2575.629 kb on + strand, within HP15_2436 at 2575.718 kb on + strand, within HP15_2436 at 2575.721 kb on - strand, within HP15_2436 at 2575.786 kb on + strand, within HP15_2436 at 2575.910 kb on + strand, within HP15_2436 at 2575.943 kb on + strand, within HP15_2436 at 2575.951 kb on - strand, within HP15_2436 at 2575.987 kb on + strand, within HP15_2436 at 2576.007 kb on + strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.210 kb on + strand at 2576.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 2,574,369 - HP15_2434 0.59 -1.2 2,574,369 - HP15_2434 0.59 -2.2 2,574,560 - -0.8 2,574,617 + -5.0 2,574,705 + HP15_2435 0.15 -5.6 2,574,713 - HP15_2435 0.16 -1.7 2,574,732 + HP15_2435 0.18 -4.4 2,574,771 + HP15_2435 0.23 -2.8 2,574,803 + HP15_2435 0.27 -2.8 2,574,836 + HP15_2435 0.32 -3.5 2,574,853 + HP15_2435 0.34 -2.3 2,575,104 + HP15_2435 0.66 -3.6 2,575,137 + HP15_2435 0.70 -2.8 2,575,142 + HP15_2435 0.71 -3.6 2,575,155 - HP15_2435 0.72 -1.6 2,575,161 + HP15_2435 0.73 -5.0 2,575,225 + HP15_2435 0.81 -3.0 2,575,233 - HP15_2435 0.82 -4.1 2,575,233 - HP15_2435 0.82 -1.7 2,575,360 - -0.9 2,575,377 + -2.0 2,575,495 + HP15_2436 0.16 -2.7 2,575,500 + HP15_2436 0.16 -3.4 2,575,503 - HP15_2436 0.17 -2.3 2,575,603 - HP15_2436 0.29 -3.2 2,575,613 + HP15_2436 0.30 -4.9 2,575,629 + HP15_2436 0.32 -4.3 2,575,718 + HP15_2436 0.43 -0.5 2,575,721 - HP15_2436 0.44 -1.2 2,575,786 + HP15_2436 0.52 -2.1 2,575,910 + HP15_2436 0.67 -4.2 2,575,943 + HP15_2436 0.71 -3.1 2,575,951 - HP15_2436 0.72 -2.6 2,575,987 + HP15_2436 0.76 -3.5 2,576,007 + HP15_2436 0.79 -3.8 2,576,073 - HP15_2436 0.87 -0.3 2,576,073 - HP15_2436 0.87 -3.0 2,576,210 + -1.4 2,576,260 + -0.5
Or see this region's nucleotide sequence