Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2174 and HP15_2175 are separated by 157 nucleotides HP15_2175 and HP15_2176 are separated by 68 nucleotides
HP15_2174: HP15_2174 - 6-phosphogluconate dehydratase, at 2,284,047 to 2,285,879
_2174
HP15_2175: HP15_2175 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 2,286,037 to 2,287,041
_2175
HP15_2176: HP15_2176 - pyruvate kinase II, at 2,287,110 to 2,288,558
_2176
Position (kb)
2286
2287
2288 Strain fitness (log2 ratio)
-2
-1
0
1 at 2285.039 kb on - strand, within HP15_2174 at 2285.056 kb on + strand, within HP15_2174 at 2285.109 kb on + strand, within HP15_2174 at 2285.275 kb on + strand, within HP15_2174 at 2285.324 kb on + strand, within HP15_2174 at 2285.436 kb on - strand, within HP15_2174 at 2285.522 kb on - strand, within HP15_2174 at 2285.643 kb on + strand, within HP15_2174 at 2285.740 kb on + strand at 2285.753 kb on - strand at 2285.762 kb on - strand at 2286.122 kb on + strand at 2286.147 kb on + strand, within HP15_2175 at 2286.183 kb on + strand, within HP15_2175 at 2286.330 kb on - strand, within HP15_2175 at 2286.362 kb on - strand, within HP15_2175 at 2286.372 kb on + strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.409 kb on - strand, within HP15_2175 at 2286.421 kb on - strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.574 kb on + strand, within HP15_2175 at 2286.610 kb on + strand, within HP15_2175 at 2286.612 kb on + strand, within HP15_2175 at 2286.625 kb on - strand, within HP15_2175 at 2286.987 kb on - strand at 2287.023 kb on + strand at 2287.031 kb on - strand at 2287.031 kb on - strand at 2287.318 kb on + strand, within HP15_2176 at 2287.371 kb on + strand, within HP15_2176 at 2287.409 kb on + strand, within HP15_2176 at 2287.451 kb on + strand, within HP15_2176 at 2287.948 kb on - strand, within HP15_2176 at 2287.968 kb on + strand, within HP15_2176
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 2,285,039 - HP15_2174 0.54 -0.4 2,285,056 + HP15_2174 0.55 -0.4 2,285,109 + HP15_2174 0.58 +0.5 2,285,275 + HP15_2174 0.67 -0.7 2,285,324 + HP15_2174 0.70 -1.4 2,285,436 - HP15_2174 0.76 -1.6 2,285,522 - HP15_2174 0.80 -0.0 2,285,643 + HP15_2174 0.87 -1.9 2,285,740 + -0.4 2,285,753 - -0.5 2,285,762 - -0.3 2,286,122 + +0.2 2,286,147 + HP15_2175 0.11 +0.2 2,286,183 + HP15_2175 0.15 +0.3 2,286,330 - HP15_2175 0.29 +0.6 2,286,362 - HP15_2175 0.32 +1.1 2,286,372 + HP15_2175 0.33 +0.5 2,286,402 - HP15_2175 0.36 +0.8 2,286,402 - HP15_2175 0.36 +0.7 2,286,409 - HP15_2175 0.37 +0.2 2,286,421 - HP15_2175 0.38 +1.0 2,286,529 + HP15_2175 0.49 +0.5 2,286,529 + HP15_2175 0.49 +1.0 2,286,574 + HP15_2175 0.53 +0.8 2,286,610 + HP15_2175 0.57 +0.3 2,286,612 + HP15_2175 0.57 +0.2 2,286,625 - HP15_2175 0.59 +1.2 2,286,987 - +0.9 2,287,023 + -1.1 2,287,031 - +0.4 2,287,031 - +0.3 2,287,318 + HP15_2176 0.14 +1.0 2,287,371 + HP15_2176 0.18 +0.9 2,287,409 + HP15_2176 0.21 +1.0 2,287,451 + HP15_2176 0.24 +1.0 2,287,948 - HP15_2176 0.58 -0.0 2,287,968 + HP15_2176 0.59 +0.9
Or see this region's nucleotide sequence