Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27700 and BWI76_RS27705 are separated by 50 nucleotides BWI76_RS27705 and BWI76_RS27710 are separated by 161 nucleotides
BWI76_RS27700: BWI76_RS27700 - multidrug transporter, at 5,748,464 to 5,749,828
_RS27700
BWI76_RS27705: BWI76_RS27705 - Bcr/CflA family drug resistance efflux transporter, at 5,749,879 to 5,751,045
_RS27705
BWI76_RS27710: BWI76_RS27710 - N-acetylmuramic acid 6-phosphate etherase, at 5,751,207 to 5,752,109
_RS27710
Position (kb) 5749
5750
5751
5752 Strain fitness (log2 ratio) -1
0
1
2 at 5749.015 kb on - strand, within BWI76_RS27700 at 5749.015 kb on - strand, within BWI76_RS27700 at 5749.321 kb on - strand, within BWI76_RS27700 at 5749.351 kb on + strand, within BWI76_RS27700 at 5749.439 kb on - strand, within BWI76_RS27700 at 5749.491 kb on + strand, within BWI76_RS27700 at 5749.638 kb on - strand, within BWI76_RS27700 at 5749.673 kb on + strand, within BWI76_RS27700 at 5749.751 kb on + strand at 5749.986 kb on + strand at 5750.039 kb on + strand, within BWI76_RS27705 at 5750.045 kb on + strand, within BWI76_RS27705 at 5750.045 kb on + strand, within BWI76_RS27705 at 5750.127 kb on - strand, within BWI76_RS27705 at 5750.221 kb on - strand, within BWI76_RS27705 at 5750.221 kb on - strand, within BWI76_RS27705 at 5750.281 kb on + strand, within BWI76_RS27705 at 5750.357 kb on + strand, within BWI76_RS27705 at 5750.396 kb on + strand, within BWI76_RS27705 at 5750.403 kb on - strand at 5750.404 kb on - strand, within BWI76_RS27705 at 5750.521 kb on + strand, within BWI76_RS27705 at 5750.545 kb on - strand, within BWI76_RS27705 at 5750.559 kb on - strand, within BWI76_RS27705 at 5750.636 kb on + strand, within BWI76_RS27705 at 5750.636 kb on + strand, within BWI76_RS27705 at 5750.636 kb on + strand, within BWI76_RS27705 at 5750.644 kb on - strand, within BWI76_RS27705 at 5750.644 kb on - strand, within BWI76_RS27705 at 5750.644 kb on - strand, within BWI76_RS27705 at 5750.741 kb on + strand, within BWI76_RS27705 at 5751.332 kb on - strand, within BWI76_RS27710 at 5751.345 kb on - strand, within BWI76_RS27710 at 5751.574 kb on + strand, within BWI76_RS27710 at 5751.612 kb on + strand, within BWI76_RS27710 at 5751.666 kb on + strand, within BWI76_RS27710 at 5751.800 kb on + strand, within BWI76_RS27710 at 5751.802 kb on - strand, within BWI76_RS27710 at 5751.856 kb on + strand, within BWI76_RS27710 at 5751.866 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.874 kb on - strand, within BWI76_RS27710 at 5751.875 kb on - strand, within BWI76_RS27710
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 5,749,015 - BWI76_RS27700 0.40 +0.3 5,749,015 - BWI76_RS27700 0.40 -0.4 5,749,321 - BWI76_RS27700 0.63 +0.4 5,749,351 + BWI76_RS27700 0.65 -0.6 5,749,439 - BWI76_RS27700 0.71 +2.6 5,749,491 + BWI76_RS27700 0.75 -0.2 5,749,638 - BWI76_RS27700 0.86 +1.8 5,749,673 + BWI76_RS27700 0.89 +0.7 5,749,751 + +0.4 5,749,986 + -0.3 5,750,039 + BWI76_RS27705 0.14 -0.3 5,750,045 + BWI76_RS27705 0.14 +1.0 5,750,045 + BWI76_RS27705 0.14 -1.1 5,750,127 - BWI76_RS27705 0.21 +0.3 5,750,221 - BWI76_RS27705 0.29 +0.6 5,750,221 - BWI76_RS27705 0.29 +0.2 5,750,281 + BWI76_RS27705 0.34 +0.5 5,750,357 + BWI76_RS27705 0.41 +0.6 5,750,396 + BWI76_RS27705 0.44 +0.3 5,750,403 - -0.2 5,750,404 - BWI76_RS27705 0.45 +1.8 5,750,521 + BWI76_RS27705 0.55 +0.4 5,750,545 - BWI76_RS27705 0.57 +0.7 5,750,559 - BWI76_RS27705 0.58 +0.3 5,750,636 + BWI76_RS27705 0.65 -0.0 5,750,636 + BWI76_RS27705 0.65 +0.2 5,750,636 + BWI76_RS27705 0.65 -0.3 5,750,644 - BWI76_RS27705 0.66 -0.4 5,750,644 - BWI76_RS27705 0.66 -1.5 5,750,644 - BWI76_RS27705 0.66 +2.0 5,750,741 + BWI76_RS27705 0.74 +1.6 5,751,332 - BWI76_RS27710 0.14 -0.5 5,751,345 - BWI76_RS27710 0.15 +0.4 5,751,574 + BWI76_RS27710 0.41 -0.7 5,751,612 + BWI76_RS27710 0.45 +0.2 5,751,666 + BWI76_RS27710 0.51 -0.6 5,751,800 + BWI76_RS27710 0.66 -1.2 5,751,802 - BWI76_RS27710 0.66 +0.5 5,751,856 + BWI76_RS27710 0.72 -0.7 5,751,866 + BWI76_RS27710 0.73 -1.3 5,751,867 + BWI76_RS27710 0.73 -0.8 5,751,867 + BWI76_RS27710 0.73 -0.2 5,751,867 + BWI76_RS27710 0.73 -0.7 5,751,874 - BWI76_RS27710 0.74 -0.9 5,751,875 - BWI76_RS27710 0.74 -0.5
Or see this region's nucleotide sequence