Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27625 and BWI76_RS27630 are separated by 1 nucleotides BWI76_RS27630 and BWI76_RS27635 overlap by 4 nucleotides BWI76_RS27635 and BWI76_RS27640 are separated by 14 nucleotides BWI76_RS27640 and BWI76_RS27645 are separated by 169 nucleotides
BWI76_RS27625: BWI76_RS27625 - NADPH:quinone reductase, at 5,733,114 to 5,734,121
_RS27625
BWI76_RS27630: BWI76_RS27630 - antibiotic biosynthesis monooxygenase, at 5,734,123 to 5,734,461
_RS27630
BWI76_RS27635: BWI76_RS27635 - AraC family transcriptional regulator, at 5,734,458 to 5,735,411
_RS27635
BWI76_RS27640: BWI76_RS27640 - hypothetical protein, at 5,735,426 to 5,736,205
_RS27640
BWI76_RS27645: BWI76_RS27645 - ADP-ribose pyrophosphatase, at 5,736,375 to 5,736,929
_RS27645
Position (kb) 5734
5735
5736 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5733.469 kb on - strand, within BWI76_RS27625 at 5733.532 kb on + strand, within BWI76_RS27625 at 5733.830 kb on + strand, within BWI76_RS27625 at 5733.870 kb on - strand, within BWI76_RS27625 at 5733.905 kb on - strand, within BWI76_RS27625 at 5733.924 kb on + strand, within BWI76_RS27625 at 5734.115 kb on + strand at 5734.123 kb on - strand at 5734.160 kb on + strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.307 kb on + strand, within BWI76_RS27630 at 5734.436 kb on + strand at 5734.477 kb on + strand at 5734.498 kb on - strand at 5734.533 kb on + strand at 5734.567 kb on - strand, within BWI76_RS27635 at 5734.585 kb on + strand, within BWI76_RS27635 at 5735.074 kb on - strand, within BWI76_RS27635 at 5735.090 kb on + strand, within BWI76_RS27635 at 5735.145 kb on + strand, within BWI76_RS27635 at 5735.348 kb on + strand at 5735.366 kb on + strand at 5735.395 kb on + strand at 5735.503 kb on + strand at 5735.533 kb on - strand, within BWI76_RS27640 at 5735.674 kb on + strand, within BWI76_RS27640 at 5735.830 kb on - strand, within BWI76_RS27640 at 5735.835 kb on - strand, within BWI76_RS27640 at 5735.928 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5736.003 kb on - strand, within BWI76_RS27640 at 5736.180 kb on - strand at 5736.188 kb on - strand at 5736.347 kb on - strand at 5736.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 5,733,469 - BWI76_RS27625 0.35 -0.2 5,733,532 + BWI76_RS27625 0.41 +1.0 5,733,830 + BWI76_RS27625 0.71 -0.8 5,733,870 - BWI76_RS27625 0.75 +0.5 5,733,905 - BWI76_RS27625 0.78 +0.7 5,733,924 + BWI76_RS27625 0.80 -1.5 5,734,115 + +0.6 5,734,123 - -0.4 5,734,160 + BWI76_RS27630 0.11 -0.2 5,734,163 - BWI76_RS27630 0.12 -0.8 5,734,163 - BWI76_RS27630 0.12 +0.7 5,734,163 - BWI76_RS27630 0.12 -1.4 5,734,307 + BWI76_RS27630 0.54 -1.0 5,734,436 + -0.4 5,734,477 + +1.7 5,734,498 - +0.6 5,734,533 + -0.3 5,734,567 - BWI76_RS27635 0.11 +0.8 5,734,585 + BWI76_RS27635 0.13 +0.9 5,735,074 - BWI76_RS27635 0.65 +2.2 5,735,090 + BWI76_RS27635 0.66 +0.2 5,735,145 + BWI76_RS27635 0.72 -1.0 5,735,348 + -0.6 5,735,366 + -0.3 5,735,395 + +0.5 5,735,503 + -0.4 5,735,533 - BWI76_RS27640 0.14 -0.7 5,735,674 + BWI76_RS27640 0.32 -0.2 5,735,830 - BWI76_RS27640 0.52 +0.4 5,735,835 - BWI76_RS27640 0.52 -1.9 5,735,928 + BWI76_RS27640 0.64 -0.1 5,735,955 + BWI76_RS27640 0.68 -0.8 5,735,955 + BWI76_RS27640 0.68 -2.2 5,736,003 - BWI76_RS27640 0.74 +0.5 5,736,180 - +0.2 5,736,188 - +1.3 5,736,347 - +0.3 5,736,361 - -0.6
Or see this region's nucleotide sequence