Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26680 and BWI76_RS26685 are separated by 71 nucleotides BWI76_RS26685 and BWI76_RS26690 are separated by 51 nucleotides BWI76_RS26690 and BWI76_RS26695 are separated by 121 nucleotides
BWI76_RS26680: BWI76_RS26680 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 5,524,500 to 5,525,342
_RS26680
BWI76_RS26685: BWI76_RS26685 - glutathione-disulfide reductase, at 5,525,414 to 5,526,766
_RS26685
BWI76_RS26690: BWI76_RS26690 - glutathione S-transferase, at 5,526,818 to 5,527,441
_RS26690
BWI76_RS26695: BWI76_RS26695 - iron-containing alcohol dehydrogenase, at 5,527,563 to 5,528,711
_RS26695
Position (kb)
5525
5526
5527 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5524.432 kb on + strand at 5524.442 kb on + strand at 5524.445 kb on - strand at 5524.512 kb on + strand at 5524.515 kb on - strand at 5524.538 kb on - strand at 5524.586 kb on - strand, within BWI76_RS26680 at 5524.633 kb on - strand, within BWI76_RS26680 at 5524.719 kb on - strand, within BWI76_RS26680 at 5524.760 kb on + strand, within BWI76_RS26680 at 5524.784 kb on + strand, within BWI76_RS26680 at 5524.827 kb on + strand, within BWI76_RS26680 at 5524.889 kb on + strand, within BWI76_RS26680 at 5524.938 kb on - strand, within BWI76_RS26680 at 5524.953 kb on - strand, within BWI76_RS26680 at 5525.527 kb on + strand at 5525.758 kb on - strand, within BWI76_RS26685 at 5525.845 kb on - strand, within BWI76_RS26685 at 5525.882 kb on - strand, within BWI76_RS26685 at 5526.091 kb on - strand, within BWI76_RS26685 at 5526.159 kb on + strand, within BWI76_RS26685 at 5526.170 kb on + strand, within BWI76_RS26685 at 5526.178 kb on - strand, within BWI76_RS26685 at 5526.440 kb on + strand, within BWI76_RS26685 at 5526.473 kb on - strand, within BWI76_RS26685 at 5526.603 kb on + strand, within BWI76_RS26685 at 5526.756 kb on - strand at 5526.879 kb on - strand at 5526.881 kb on - strand, within BWI76_RS26690 at 5526.954 kb on + strand, within BWI76_RS26690 at 5526.954 kb on + strand, within BWI76_RS26690 at 5526.993 kb on - strand, within BWI76_RS26690 at 5527.052 kb on + strand, within BWI76_RS26690 at 5527.110 kb on + strand, within BWI76_RS26690 at 5527.110 kb on - strand, within BWI76_RS26690 at 5527.297 kb on + strand, within BWI76_RS26690 at 5527.305 kb on - strand, within BWI76_RS26690 at 5527.330 kb on + strand, within BWI76_RS26690 at 5527.351 kb on - strand, within BWI76_RS26690 at 5527.395 kb on + strand at 5527.519 kb on + strand at 5527.581 kb on - strand at 5527.753 kb on - strand, within BWI76_RS26695
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 5,524,432 + +0.5 5,524,442 + -1.2 5,524,445 - -0.1 5,524,512 + +1.0 5,524,515 - -1.8 5,524,538 - +0.6 5,524,586 - BWI76_RS26680 0.10 -0.5 5,524,633 - BWI76_RS26680 0.16 -0.6 5,524,719 - BWI76_RS26680 0.26 -0.6 5,524,760 + BWI76_RS26680 0.31 -1.4 5,524,784 + BWI76_RS26680 0.34 +0.7 5,524,827 + BWI76_RS26680 0.39 +0.1 5,524,889 + BWI76_RS26680 0.46 -1.1 5,524,938 - BWI76_RS26680 0.52 -1.1 5,524,953 - BWI76_RS26680 0.54 +0.2 5,525,527 + -2.9 5,525,758 - BWI76_RS26685 0.25 +0.5 5,525,845 - BWI76_RS26685 0.32 -1.9 5,525,882 - BWI76_RS26685 0.35 -0.7 5,526,091 - BWI76_RS26685 0.50 -2.2 5,526,159 + BWI76_RS26685 0.55 -1.6 5,526,170 + BWI76_RS26685 0.56 -1.6 5,526,178 - BWI76_RS26685 0.56 +0.0 5,526,440 + BWI76_RS26685 0.76 -1.5 5,526,473 - BWI76_RS26685 0.78 -0.8 5,526,603 + BWI76_RS26685 0.88 -3.0 5,526,756 - -2.8 5,526,879 - +1.0 5,526,881 - BWI76_RS26690 0.10 -0.0 5,526,954 + BWI76_RS26690 0.22 -0.6 5,526,954 + BWI76_RS26690 0.22 -0.5 5,526,993 - BWI76_RS26690 0.28 +0.6 5,527,052 + BWI76_RS26690 0.38 +0.2 5,527,110 + BWI76_RS26690 0.47 -0.0 5,527,110 - BWI76_RS26690 0.47 -0.6 5,527,297 + BWI76_RS26690 0.77 +0.3 5,527,305 - BWI76_RS26690 0.78 -0.1 5,527,330 + BWI76_RS26690 0.82 +1.4 5,527,351 - BWI76_RS26690 0.85 -0.3 5,527,395 + -0.6 5,527,519 + +0.6 5,527,581 - +0.0 5,527,753 - BWI76_RS26695 0.17 +0.3
Or see this region's nucleotide sequence