Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25175

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25170 and BWI76_RS25175 are separated by 15 nucleotidesBWI76_RS25175 and BWI76_RS25180 are separated by 95 nucleotidesBWI76_RS25180 and BWI76_RS25185 are separated by 19 nucleotidesBWI76_RS25185 and BWI76_RS25190 are separated by 259 nucleotides BWI76_RS25170: BWI76_RS25170 - GTPase ObgE, at 5,237,810 to 5,238,982 _RS25170 BWI76_RS25175: BWI76_RS25175 - EamA family transporter, at 5,238,998 to 5,239,963 _RS25175 BWI76_RS25180: BWI76_RS25180 - 50S ribosomal protein L27, at 5,240,059 to 5,240,316 _RS25180 BWI76_RS25185: BWI76_RS25185 - 50S ribosomal protein L21, at 5,240,336 to 5,240,647 _RS25185 BWI76_RS25190: BWI76_RS25190 - octaprenyl-diphosphate synthase, at 5,240,907 to 5,241,878 _RS25190 Position (kb) 5238 5239 5240Strain fitness (log2 ratio) -1 0 1at 5239.124 kb on - strand, within BWI76_RS25175at 5239.135 kb on - strand, within BWI76_RS25175at 5239.456 kb on - strand, within BWI76_RS25175at 5239.456 kb on - strand, within BWI76_RS25175

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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5,239,124 - BWI76_RS25175 0.13 +0.2
5,239,135 - BWI76_RS25175 0.14 -0.8
5,239,456 - BWI76_RS25175 0.47 +1.3
5,239,456 - BWI76_RS25175 0.47 +1.4

Or see this region's nucleotide sequence